RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
TRAPPC12-211ENST00000452495 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-211ENST00000452495 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
TRAPPC12-211ENST00000452495 MED13Q9UHV7 2174 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ZFHX4Q86UP3 3567 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 IGHV1-45A0A0A0MS14 117 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ZNF195O14628 629 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 FGF17O60258 216 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 LDB3O75112 727 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 BCKDHAP12694 445 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 DDX5P17844 614 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 PIK3R1P27986 724 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ALDH9A1P49189 494 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 OR4D2P58180 307 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 PLIN5Q00G26 463 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 FOLH1Q04609 750 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 EEF1A2Q05639 463 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 TERF2Q15554 542 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 FAM71E1Q6IPT2 247 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 LARP4Q71RC2 724 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 MAVSQ7Z434 540 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 FAM9CQ8IZT9 166 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ACTRT2Q8TDY3 377 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ANKRD9Q96BM1 317 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 TUBB6Q9BUF5 446 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ZNF700Q9H0M5 742 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 PRORYQ9H606 182 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ADAP2Q9NPF8 381 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 PSME2Q9UL46 239 aa13.67□□□□□ -0.22
TRAPPC12-211ENST00000452495 ZZEF1O43149 2961 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 NSG1A0A0A6YYJ2 146 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 OR2W5A6NFC9 320 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 GLOD5A6NK44 160 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 TGFBR3LH3BV60 316 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 GPR75O95800 540 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 ITGB2P05107 769 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 COX7A2P14406 83 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 DDCP20711 480 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 EPHA3P29320 983 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 HPCAL1P37235 193 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 RPL3P39023 403 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 STT3AP46977 705 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 AP2B1P63010 937 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 PCOLCEQ15113 449 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 ELAVL1Q15717 326 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 DCAF10Q5QP82 559 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 VWA5B1Q5TIE3 1220 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 IL23RQ5VWK5 629 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 EPGNQ6UW88 154 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 ACAD11Q709F0 780 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 GPR155Q7Z3F1 870 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 SPATA19Q7Z5L4 167 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 APLFQ8IW19 511 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 SAMD14Q8IZD0 417 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 LIX1Q8N485 282 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 OR4K14Q8NGD5 310 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 CDC26Q8NHZ8 85 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 C8orf44Q96CB5 159 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 KLHL29Q96CT2 875 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 MTERF3Q96E29 417 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 LPAR4Q99677 370 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 C1orf50Q9BV19 199 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
TRAPPC12-211ENST00000452495 SAGE2PA6NJ88 616 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 PGRMC2O15173 223 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 TBX19O60806 448 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 TROVE2P10155 538 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 TACR1P25103 407 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 GALNSP34059 522 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 C21orf58P58505 322 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 C2orf80Q0P641 193 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 AIMP2Q13155 320 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 EXT1Q16394 746 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 DEFB109BQ30KR1 87 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 SLC9B1Q4ZJI4 515 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 CPZQ66K79 652 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 BORAQ6PGQ7 559 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 PAPD4Q6PIY7 484 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 MMP21Q8N119 569 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 CLEC1AQ8NC01 280 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 OR14A16Q8NHC5 309 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 DGAT2Q96PD7 388 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 TSSK3Q96PN8 268 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 ALOXE3Q9BYJ1 711 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 WDR55Q9H6Y2 383 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 GIMAP4Q9NUV9 329 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 FGFR1OP2Q9NVK5 253 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 UTS2RQ9UKP6 389 aa13.65□□□□□ -0.22
TRAPPC12-211ENST00000452495 CES1P1Q9UKY3 287 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms