RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 BUD31P41223 144 aaPredicted RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 SOX3P41225 446 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 STT3AP46977 705 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 SERPINB9P50453 376 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 CCNG1P51959 295 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 HK2P52789 917 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 ARFIP1P53367 373 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 GLE1Q53GS7 698 aaKnown RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 TECRLQ5HYJ1 363 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 OR4N5Q8IXE1 308 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 PLD6Q8N2A8 252 aaKnown RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 ZCCHC7Q8N3Z6 543 aaKnown RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 PTGR2Q8N8N7 351 aaPredicted RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 ZFP62Q8NB50 900 aaPredicted RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 NOA1Q8NC60 698 aaKnown RBP11.96□□□□□ -0.49
CHD3-206ENST00000452447 C16orf52Q8NHV5 167 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 AGAP11Q8TF27 550 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 TANKQ92844 425 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 PHF21BQ96EK2 531 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 SCYL1Q96KG9 808 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 FUT8Q9BYC5 575 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 CHST11Q9NPF2 352 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 TMCO1Q9UM00 188 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 MEMO1Q9Y316 297 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 APCP25054 2843 aa11.96□□□□□ -0.49
CHD3-206ENST00000452447 POC1B-GALNT4F8VUJ3 575 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 ZNHIT1O43257 154 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 SMIM24O75264 130 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 AGAP20933 346 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 HTR1EP28566 365 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 PTGER1P34995 402 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 PTGS2P35354 604 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 NEK2P51955 445 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 ADORA2A-AS1P86434 159 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 PLIN5Q00G26 463 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 TNFRSF17Q02223 184 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 FOLH1Q04609 750 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 CUL3Q13618 768 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 TSNAXIP1Q2TAA8 658 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 UBAP2Q5T6F2 1119 aaKnown RBP11.96□□□□□ -0.5
CHD3-206ENST00000452447 CYP20A1Q6UW02 462 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 DOLPP1Q86YN1 238 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 ZNF321PQ8N8H1 164 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 SENP5Q96HI0 755 aaPredicted RBP11.96□□□□□ -0.5
CHD3-206ENST00000452447 ART5Q96L15 291 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 PAFAH2Q99487 392 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 NOL11Q9H8H0 719 aaKnown RBP11.96□□□□□ -0.5
CHD3-206ENST00000452447 WDR41Q9HAD4 459 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 ZNF358Q9NW07 568 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 LYARQ9NX58 379 aaKnown RBP11.96□□□□□ -0.5
CHD3-206ENST00000452447 ATG4BQ9Y4P1 393 aa11.96□□□□□ -0.5
CHD3-206ENST00000452447 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 A0A1B0GTH9 108 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 E9PLN8 166 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 ACOT7O00154 380 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 FOXE1O00358 373 aaPredicted RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 PROM1O43490 865 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 ZNF500O60304 480 aaPredicted RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 ETHE1O95571 254 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 TPOP07202 933 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 CNTFP26441 200 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 PLGLB1Q02325 96 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 ZNF630Q2M218 657 aaPredicted RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 CMPK2Q5EBM0 449 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 C18orf63Q68DL7 685 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 ARHGAP11AQ6P4F7 1023 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 OPN5Q6U736 354 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 RTL4Q6ZR62 310 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 NUDT13Q86X67 352 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 WDR20Q8TBZ3 569 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 ZNF721Q8TF20 911 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 ISL2Q96A47 359 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 PPWD1Q96BP3 646 aaKnown RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 MTFMTQ96DP5 389 aaKnown RBP11.95□□□□□ -0.5
CHD3-206ENST00000452447 SGCZQ96LD1 299 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 VKORC1Q9BQB6 163 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.51e-5■■■■□ 19.8
CHD3-206ENST00000452447 PSD3Q9NYI0 1048 aa11.95□□□□□ -0.5
CHD3-206ENST00000452447 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 OR10H2O60403 315 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 EEDO75530 441 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 PDE9AO76083 593 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 FAM58BPP0C7Q3 252 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 COL6A2P12110 1019 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 ALOX15P16050 662 aaPredicted RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 BSGP35613 385 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 MAGEA12P43365 314 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 PPIAP62937 165 aaKnown RBP11.94□□□□□ -0.5
CHD3-206ENST00000452447 ASPHQ12797 758 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 MPEG1Q2M385 716 aa11.94□□□□□ -0.5
CHD3-206ENST00000452447 ZNF750Q32MQ0 723 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms