RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PRTFDC1Q9NRG1 225 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 TMEM45AQ9NWC5 275 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 PSME2Q9UL46 239 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 MKL2Q9ULH7 1088 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 CLDN16Q9Y5I7 305 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
SCN9A-204ENST00000452182 TMEM8BA6NDV4 472 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 PGRMC2O15173 223 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 GPR75O95800 540 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 HEXBP07686 556 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 LIFP15018 202 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 DDX5P17844 614 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MMP11P24347 488 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 EIF2S3P41091 472 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ATP4BP51164 291 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 EFNA3P52797 238 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 EMP2P54851 167 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 BTG2P78543 158 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 FOXK2Q01167 660 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MC1RQ01726 317 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ACTN3Q08043 901 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SLC13A2Q13183 592 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SERTAD2Q14140 314 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SSPNQ14714 243 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CEBPEQ15744 281 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CRTC2Q53ET0 693 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 TMEM205Q6UW68 189 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 UNQ6494/PRO21346Q6UXR6 183 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SAMD14Q8IZD0 417 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CDC26Q8NHZ8 85 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ANKRD9Q96BM1 317 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 PTCHD1Q96NR3 888 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CCT8L2Q96SF2 557 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CRB3Q9BUF7 120 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MIEF1Q9NQG6 463 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ZIM2Q9NZV7 527 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 IL17BQ9UHF5 180 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ATP6V1HQ9UI12 483 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 C3orf18Q9UK00 162 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 FRYQ5TBA9 3013 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SCN2AQ99250 2005 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 A0A1W2PQ72 361 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 TCRBV16S1A1N1A0A5B0 115 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 GLOD5A6NK44 160 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 GABRR3A8MPY1 467 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SCAMP2O15127 329 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 FGF17O60258 216 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ALOX12BO75342 701 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 PRKRAO75569 313 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CREG1O75629 220 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 HPCAL1P37235 193 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 FOLH1Q04609 750 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 RPS6KA2Q15349 733 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 NSDHLQ15738 373 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 DPY19L1Q2PZI1 675 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MFSD4BQ5TF39 518 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 RIPOR1Q6ZS17 1223 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 SHISA6Q6ZSJ9 500 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 PRSS58Q8IYP2 241 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MMP21Q8N119 569 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 MIER2Q8N344 545 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 NATD1Q8N6N6 113 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 GLB1L3Q8NCI6 653 aaPredicted RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 OR4K14Q8NGD5 310 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 CLHC1Q8NHS4 586 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 METTL21AQ8WXB1 218 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 UCN3Q969E3 161 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 TESCQ96BS2 214 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 PRPF18Q99633 342 aaKnown RBP10.87□□□□□ -0.67
SCN9A-204ENST00000452182 DPY30Q9C005 99 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 ZNF385DQ9H6B1 395 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 NECTIN3Q9NQS3 549 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 UTS2RQ9UKP6 389 aa10.87□□□□□ -0.67
SCN9A-204ENST00000452182 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 LOC102723996A0A087X1L8 192 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 OR2W5A6NFC9 320 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 C1QTNF9BB2RNN3 333 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 RRP8O43159 456 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 KLK10O43240 276 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 LDB3O75112 727 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 LRATO95237 230 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 C1QTNF9P0C862 333 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 C8orf89P0DMQ9 161 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 MAOAP21397 527 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 PIK3R1P27986 724 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 GALNSP34059 522 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 ALDH9A1P49189 494 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 FOXL2P58012 376 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 STX1BP61266 288 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 RPS18P62269 152 aaKnown RBP10.86□□□□□ -0.67
SCN9A-204ENST00000452182 STX4Q12846 297 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 SQLEQ14534 574 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 UGT8Q16880 541 aa10.86□□□□□ -0.67
SCN9A-204ENST00000452182 CPZQ66K79 652 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms