RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SCARF2Q96GP6 870 aaPredicted RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 NPLQ9BXD5 320 aaPredicted RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 TMEM38AQ9H6F2 299 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 EPS8L2Q9H6S3 715 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 MOSPD1Q9UJG1 213 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 C3orf18Q9UK00 162 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 WBP11Q9Y2W2 641 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 IGKV1-8A0A0C4DH67 115 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 A0A1W2PRB8 838 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 DCDC2BA2VCK2 349 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 RTCAO00442 366 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 SLC16A6O15403 523 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 CAPN5O15484 640 aaPredicted RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 KCNJ13O60928 360 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 DIRAS1O95057 198 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 CELA2BP08218 269 aaPredicted RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 ITGAMP11215 1152 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 DDCP20711 480 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 FPR1P21462 350 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 SLC5A2P31639 672 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 DNAJA1P31689 397 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 CRATP43155 626 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 YAP1P46937 504 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 CDK9P50750 372 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 RAB28P51157 221 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.784e-7■■■■□ 22.8
PKP4-206ENST00000452162 RBBP4Q09028 425 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 FADDQ13158 208 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 C1orf61Q13536 156 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 ZBED5Q49AG3 693 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 UBE3DQ7Z6J8 389 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 CYP4Z1Q86W10 505 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 RAB42Q8N4Z0 105 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 OR2A1Q8NGT9 310 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 OR2L8Q8NGY9 312 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 TM4SF18Q96CE8 201 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 NRBF2Q96F24 287 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 XKR8Q9H6D3 395 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 C1GALT1Q9NS00 363 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 IMP3Q9NV31 184 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 ADPRHL2Q9NX46 363 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 DLL3Q9NYJ7 618 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 APOBEC3BQ9UH17 382 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 RSL24D1Q9UHA3 163 aaKnown RBP10.17□□□□□ -0.78
PKP4-206ENST00000452162 PCDHGB2Q9Y5G2 931 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 PCDHGA8Q9Y5G5 932 aa10.17□□□□□ -0.78
PKP4-206ENST00000452162 PRSS38A1L453 326 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 YKT6O15498 198 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 NDUFS4O43181 175 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 SUV39H1O43463 412 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 FKBP9O95302 570 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 IGFBP5P24593 272 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 AQP1P29972 269 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 DAPP51397 102 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 MAPK12P53778 367 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RAD23AP54725 363 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 PRDX1Q06830 199 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 CTU2Q2VPK5 515 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 PRRT3Q5FWE3 981 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RBM48Q5RL73 367 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 ZNF691Q5VV52 312 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ZNF773Q6PK81 442 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CCDC80Q76M96 950 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 PAGE2Q7Z2X7 111 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 GPR141Q7Z602 305 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 PIP4P1Q86T03 277 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CHDHQ8NE62 594 aaPredicted RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 HDAC2Q92769 488 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 TPD52L3Q96J77 140 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 DOHHQ9BU89 302 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 LRRC61Q9BV99 259 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RAB11FIP5Q9BXF6 653 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ING2Q9H160 280 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 VCX3AQ9NNX9 186 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 MIEF1Q9NQG6 463 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 DDX18Q9NVP1 670 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 PADI2Q9Y2J8 665 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 DGKBQ9Y6T7 804 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 RP1P56715 2156 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 LOC100130705A0A1B0GUX0 176 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 TNFRSF10CO14798 259 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 OR1F1O43749 312 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 LCMT2O60294 686 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 MITFO75030 526 aaPredicted RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 RASGRP1O95267 797 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 IL7RP16871 459 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CRHBPP24387 322 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 CASP9P55211 416 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 SH3BGRP55822 239 aaPredicted RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 ESRRGP62508 458 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 IL18R1Q13478 541 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 SCARB2Q14108 478 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 ELOAQ14241 798 aaKnown RBP10.16□□□□□ -0.78
PKP4-206ENST00000452162 LAPTM4AQ15012 233 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 SLC5A12Q1EHB4 618 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 KDM4DQ6B0I6 523 aa10.16□□□□□ -0.78
PKP4-206ENST00000452162 LAIR2Q6ISS4 152 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms