RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RABEP2Q9H5N1 569 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 NT5DC2Q9H857 520 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 ARL2BPQ9Y2Y0 163 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 ANGPTL3Q9Y5C1 460 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 SPACA6W5XKT8 324 aa20.23■□□□□ 0.83
C9orf3-208ENST00000451893 CACNA1DQ01668 2161 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 TRBV11-1A0A0K0K1C0 115 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 LRIT2A6NDA9 550 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 A8MT66 165 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 PRSS44E7EML9 344 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 STX16-NPEPL1H3BU86 382 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 EBAG9O00559 213 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 STX16O14662 325 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 TAPBPO15533 448 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 KLK8O60259 260 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 MAN1A2O60476 641 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SLC25A12O75746 678 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SP1P08047 785 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SMIM10L1P0DMW3 83 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 PCNAP12004 261 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 TPP2P29144 1249 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 HNRNPH1P31943 449 aaKnown RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 NAGLUP54802 743 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 MTTPP55157 894 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 OR4D1Q15615 310 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 LRRC70Q7Z2Q7 622 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 HOMEZQ8IX15 550 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 TMEM156Q8N614 296 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SRFBP1Q8NEF9 429 aaKnown RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 THAP3Q8WTV1 239 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 UBE2E3Q969T4 207 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SMIM10Q96HG1 83 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 SERINC2Q96SA4 455 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 ROGDIQ9GZN7 287 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 TSPAN10Q9H1Z9 355 aaPredicted RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 EML4Q9HC35 981 aaKnown RBP20.22■□□□□ 0.83
C9orf3-208ENST00000451893 NUDT4Q9NZJ9 180 aa20.22■□□□□ 0.83
C9orf3-208ENST00000451893 DOPEY1Q5JWR5 2465 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 SYNDIG1LA6NDD5 238 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 C4orf51C9J302 202 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 NPIPA5E9PKD4 350 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 CDK2AP1O14519 115 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 GGT5P36269 586 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 KCNC1P48547 511 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 HSD17B7P56937 341 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 STX4Q12846 297 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 CHIT1Q13231 466 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 DOC2AQ14183 400 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 METTL2BQ6P1Q9 378 aaKnown RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 CLNKQ7Z7G1 428 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 MYLK4Q86YV6 388 aaPredicted RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 WDR75Q8IWA0 830 aaKnown RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 ZNF595Q8IYB9 648 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 PDPRQ8NCN5 879 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 B3GNT7Q8NFL0 401 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 PIWIL2Q8TC59 973 aaKnown RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 SCMH1Q96GD3 660 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 NPAS2Q99743 824 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 OPTCQ9UBM4 332 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 HAO1Q9UJM8 370 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 NPIPA1Q9UND3 350 aa20.21■□□□□ 0.83
C9orf3-208ENST00000451893 TNPO3Q9Y5L0 923 aaKnown RBP20.21■□□□□ 0.83
C9orf3-208ENST00000451893 SLCO1B7G3V0H7 640 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 HSPA4LO95757 839 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 MTHFD2P13995 350 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 GFAPP14136 432 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF24P17028 368 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 CERS1P27544 350 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 ALDH18A1P54886 795 aaKnown RBP20.2■□□□□ 0.82
C9orf3-208ENST00000451893 MLF1P58340 268 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 HERVK_113P63132 956 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 RUNX2Q13950 521 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 KRTCAP3Q53RY4 240 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 ZCCHC23Q6ZST2 131 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 SLC34A3Q8N130 599 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 RELTQ969Z4 430 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 VMP1Q96GC9 406 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 KCNC2Q96PR1 638 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 CENPKQ9BS16 269 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 C1QTNF3Q9BXJ4 246 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 ERVK-6Q9BXR3 956 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 CD244Q9BZW8 370 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 RUBCNLQ9H714 662 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 RAP2CQ9Y3L5 183 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 CLCA3PQ9Y6N3 262 aa20.2■□□□□ 0.82
C9orf3-208ENST00000451893 IGKV3D-11A0A0A0MRZ8 115 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 ARHGAP10A1A4S6 786 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 SLC19A2O60779 497 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 ABOP16442 354 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 TNNI3P19429 210 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 CA7P43166 264 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 ZSCAN26Q16670 478 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 CGB2Q6NT52 195 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 GPR137Q96N19 417 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 ADAP2Q9NPF8 381 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 PTBP2Q9UKA9 531 aaKnown RBP20.19■□□□□ 0.82
C9orf3-208ENST00000451893 ERVK-11Q9UQG0 969 aa20.19■□□□□ 0.82
C9orf3-208ENST00000451893 KLF13Q9Y2Y9 288 aaPredicted RBP20.19■□□□□ 0.82
C9orf3-208ENST00000451893 USH1CQ9Y6N9 552 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms