RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PSMC3IPQ9P2W1 217 aaPredicted RBP9□□□□□ -0.97
USP54-207ENST00000451492 COPS7AQ9UBW8 275 aa9□□□□□ -0.97
USP54-207ENST00000451492 VTI1BQ9UEU0 232 aa9□□□□□ -0.97
USP54-207ENST00000451492 TMCO1Q9UM00 188 aa9□□□□□ -0.97
USP54-207ENST00000451492 DIDO1Q9BTC0 2240 aaKnown RBP9□□□□□ -0.97
USP54-207ENST00000451492 USP9YO00507 2555 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 A0A0A6YYD5 115 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 A0A0G2JMM0 328 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 IQANK1A0A1B0GTG1 560 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 A0A1B0GUH1 482 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 A0A1W2PPB8 328 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 A0A1W2PRS3 328 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 CCDC189A1A4V9 331 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ASPDHA6ND91 283 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TMEM200CA6NKL6 621 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 FAM166BA8MTA8 275 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 KIR3DP1A8MWS1 328 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 STX16-NPEPL1H3BU86 382 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 STX16O14662 325 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 HS6ST1O60243 411 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 OR10H2O60403 315 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 UGDHO60701 494 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SLC19A2O60779 497 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SUPT7LO94864 414 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 OR4F21O95013 312 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 AIFM1O95831 613 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 PDYNP01213 254 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 STSP08842 583 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SBK3P0C264 359 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 FAM58BPP0C7Q3 252 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 COL6A2P12110 1019 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ALOX15P16050 662 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 ABOP16442 354 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TAC1P20366 129 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TLX1P31314 330 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 PTGER1P34995 402 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 BSGP35613 385 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SLCO1A2P46721 670 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 STT3AP46977 705 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 GPR143P51810 404 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 HERVK_113P63132 956 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ERVK-8P63133 956 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 RNF4P78317 190 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 PLIN5Q00G26 463 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 PCDH1Q08174 1060 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 C3AR1Q16581 482 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TCHHL1Q5QJ38 904 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 LGSNQ5TDP6 509 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 LETMD1Q6P1Q0 360 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 C3P1Q6ZMU1 363 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TRMT10CQ7L0Y3 403 aaKnown RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 SULF2Q8IWU5 870 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 MORN4Q8NDC4 146 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ZNF483Q8TF39 744 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 GPR137Q96N19 417 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 TMEM237Q96Q45 408 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 RASL10BQ96S79 203 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SERPINI1Q99574 410 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ERVK-6Q9BXR3 956 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ZNF717Q9BY31 904 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 ELOVL6Q9H5J4 265 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 WDR41Q9HAD4 459 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 MS4A12Q9NXJ0 267 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 SUCOQ9UBS9 1254 aaKnown RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 SLC12A4Q9UP95 1085 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 ERVK-19Q9WJR5 959 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 KLF13Q9Y2Y9 288 aaPredicted RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 YARS2Q9Y2Z4 477 aaKnown RBP8.99□□□□□ -0.97
USP54-207ENST00000451492 PCDHGB6Q9Y5F9 930 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 MYO7BQ6PIF6 2116 aa8.99□□□□□ -0.97
USP54-207ENST00000451492 GTF3C1Q12789 2109 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 A0A1W2PR48 441 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 KLRC4-KLRK1H3BQV0 150 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PROM1O43490 865 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 DYRK3O43781 588 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PEX1O43933 1283 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 ZNF354AO60765 605 aaPredicted RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 PDE9AO76083 593 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 LRATO95237 230 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 MLYCDO95822 493 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 SHBGP04278 402 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 KLK1P06870 262 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PYGBP11216 843 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 ESRRAP11474 423 aaPredicted RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 TRHRP34981 398 aaPredicted RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 CASP6P55212 293 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PLGLB1Q02325 96 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 ASPHQ12797 758 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 CUL3Q13618 768 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 ZNF267Q14586 743 aaPredicted RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 ZNF750Q32MQ0 723 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 FRG2Q64ET8 278 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 C9orf40Q8IXQ3 194 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 MMP21Q8N119 569 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 ZCCHC7Q8N3Z6 543 aaKnown RBP8.98□□□□□ -0.97
USP54-207ENST00000451492 CDYL2Q8N8U2 506 aa8.98□□□□□ -0.97
USP54-207ENST00000451492 PSD4Q8NDX1 1056 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms