RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 NTSP30990 170 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 FEN1P39748 380 aaKnown RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 WNT3P56703 355 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 GABREP78334 506 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 FOLH1Q04609 750 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 SLC13A2Q13183 592 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 TLR1Q15399 786 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 ZNF750Q32MQ0 723 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 MINDY4Q4G0A6 757 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 VWA2Q5GFL6 755 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 ANXA8L1Q5VT79 327 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 ZNF385CQ66K41 422 aaPredicted RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 ZNF771Q7L3S4 317 aaPredicted RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 FBXO27Q8NI29 283 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 MR1Q95460 341 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 CNRIP1Q96F85 164 aaPredicted RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 ZNF764Q96H86 408 aaPredicted RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 BBS4Q96RK4 519 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 RMND5AQ9H871 391 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.21
TNF-208ENST00000449264 PSME2Q9UL46 239 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 ZNF780BQ9Y6R6 833 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 DCHS1Q96JQ0 3298 aa13.77□□□□□ -0.21
TNF-208ENST00000449264 OR2W5A6NFC9 320 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 B2RBV5 119 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 FGF17O60258 216 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 CPSF4O95639 269 aaKnown RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 KLK3P07288 261 aaPredicted RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 ABCB1P08183 1280 aaPredicted RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 AGXTP21549 392 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 PTGER1P34995 402 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 MNAT1P51948 309 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 FOXL2P58012 376 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 ART3Q13508 389 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 NFYCQ13952 458 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 ZC3H7AQ8IWR0 971 aaKnown RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 ZNF595Q8IYB9 648 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 PCYOX1LQ8NBM8 494 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 VPS37AQ8NEZ2 397 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 OR4K14Q8NGD5 310 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 TANKQ92844 425 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 ITCHQ96J02 903 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 INPP5KQ9BT40 448 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 AKIRIN1Q9H9L7 192 aaPredicted RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 MKKSQ9NPJ1 570 aaPredicted RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 PRTFDC1Q9NRG1 225 aa13.76□□□□□ -0.21
TNF-208ENST00000449264 ZNF282Q9UDV7 671 aaPredicted RBP13.76□□□□□ -0.21
TNF-208ENST00000449264 PRSS51A0A1B0GVH4 220 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 A0A1W2PRB8 838 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 RNASET2O00584 256 aaKnown RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 CLDN4O14493 209 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 BMP10O95393 424 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 C6orf47O95873 294 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 MAOAP21397 527 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 CDKN2CP42773 168 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 NCBP2P52298 156 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNF-208ENST00000449264 BTG2P78543 158 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 OCA2Q04671 838 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 HSPB3Q12988 150 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 FAM199XQ6PEV8 388 aaPredicted RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 RINLQ6ZS11 566 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 MSANTD1Q6ZTZ1 278 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 TMPRSS7Q7RTY8 843 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 DHDDSQ86SQ9 333 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 OR4A15Q8NGL6 344 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 GTF2H4Q92759 462 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 ZBED6CLQ96FA7 236 aaPredicted RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 PANX1Q96RD7 426 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SLC39A3Q9BRY0 314 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SERHLQ9NQF3 203 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 LANCL2Q9NS86 450 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNF-208ENST00000449264 TAS2R7Q9NYW3 318 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 PCDHGA3Q9Y5H0 932 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 RFXANKO14593 260 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 SCN2BO60939 215 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 KCNH1O95259 989 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 ANP32DO95626 131 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 GSNP06396 782 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 PPP2R1BP30154 601 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 XKP51811 444 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 MANFP55145 182 aaKnown RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 PCBP4P57723 403 aaKnown RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 DUSP2Q05923 314 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 STX4Q12846 297 aa13.75□□□□□ -0.21
TNF-208ENST00000449264 CAPRIN1Q14444 709 aaKnown RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 TRMT5Q32P41 509 aaKnown RBP13.75□□□□□ -0.21
TNF-208ENST00000449264 ZNF551Q7Z340 670 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms