RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ERV3-1Q14264 604 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 MPEG1Q2M385 716 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 SPRED3Q2MJR0 410 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 ZNF385CQ66K41 422 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 ZNF595Q8IYB9 648 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 OR4K14Q8NGD5 310 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 ITCHQ96J02 903 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 BBS4Q96RK4 519 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 MKKSQ9NPJ1 570 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.38■□□□□ 0.53
SGCE-207ENST00000447873 ZNF282Q9UDV7 671 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 CFAP54Q96N23 3096 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 DCDC2BA2VCK2 349 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 SCN2BO60939 215 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 LDB3O75112 727 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 KRT16P08779 473 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 PPP2R1BP30154 601 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 NTSP30990 170 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 SLC13A2Q13183 592 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 NFYCQ13952 458 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 LACTB2Q53H82 288 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 OR4N5Q8IXE1 308 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 SAMD14Q8IZD0 417 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 DPP10Q8N608 796 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 FBXO27Q8NI29 283 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 GTF2H4Q92759 462 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 CNRIP1Q96F85 164 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 PANX1Q96RD7 426 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 DPH2Q9BQC3 489 aaPredicted RBP18.38■□□□□ 0.53
SGCE-207ENST00000447873 IL1RL2Q9HB29 575 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 PRTFDC1Q9NRG1 225 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 SLC22A11Q9NSA0 550 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 MAP10Q9P2G4 905 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 BTNL2Q9UIR0 455 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 PCDHGB4Q9UN71 923 aa18.38■□□□□ 0.53
SGCE-207ENST00000447873 NUP214P35658 2090 aaPredicted RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 A0A1W2PRB8 838 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 C9orf172C9J069 976 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 FGF17O60258 216 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 JRKO75564 520 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 STK17BO94768 372 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 TNFSF15O95150 251 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 KCNH1O95259 989 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 BMP10O95393 424 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 GPR75O95800 540 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 ONECUT2O95948 504 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 C8orf89P0DMQ9 161 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 FEN1P39748 380 aaKnown RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 XKP51811 444 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 MANFP55145 182 aaKnown RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 PCBP4P57723 403 aaKnown RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 FOLH1Q04609 750 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 OCA2Q04671 838 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 MFSD4BQ5TF39 518 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 RINLQ6ZS11 566 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 COX15Q7KZN9 410 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 TMPRSS7Q7RTY8 843 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 MARCH9Q86YJ5 346 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 CLECL1Q8IZS7 167 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 MIEF2Q96C03 454 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 ROPN1LQ96C74 230 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 ZBED6CLQ96FA7 236 aaPredicted RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 CCDC115Q96NT0 180 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 SERHLQ9NQF3 203 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 GID8Q9NWU2 228 aa18.37■□□□□ 0.53
SGCE-207ENST00000447873 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
SGCE-207ENST00000447873 NUP210LQ5VU65 1888 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 RFXANKO14593 260 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 CTNSO60931 367 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 CPSF4O95639 269 aaKnown RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 CSNK2A2P19784 350 aaPredicted RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 HSD17B7P56937 341 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 ID2Q02363 134 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 TRMT5Q32P41 509 aaKnown RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 VWA2Q5GFL6 755 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 DNAJC14Q6Y2X3 702 aaPredicted RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 DHDDSQ86SQ9 333 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 ZC3H7AQ8IWR0 971 aaKnown RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 GALNT6Q8NCL4 622 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 RBM15BQ8NDT2 890 aaKnown RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 MR1Q95460 341 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 INPP5KQ9BT40 448 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 SLAMF7Q9NQ25 335 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 ACSS1Q9NUB1 689 aaPredicted RBP18.36■□□□□ 0.53
SGCE-207ENST00000447873 NDE1Q9NXR1 346 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 SLAMF8Q9P0V8 285 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 CTSFQ9UBX1 484 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 MAN2B2Q9Y2E5 1009 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 PCDHGA8Q9Y5G5 932 aa18.36■□□□□ 0.53
SGCE-207ENST00000447873 MYO1GB0I1T2 1018 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 ANP32DO95626 131 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 C6orf47O95873 294 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 NPPAP01160 153 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 ABCB1P08183 1280 aaPredicted RBP18.35■□□□□ 0.53
SGCE-207ENST00000447873 MPIP34949 423 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 FRKP42685 505 aaPredicted RBP18.35■□□□□ 0.53
SGCE-207ENST00000447873 TRPC1P48995 793 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 NCBP2P52298 156 aaKnown RBP eCLIP18.35■□□□□ 0.531e-9■■□□□ 13.4
SGCE-207ENST00000447873 BTG2P78543 158 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 SLC25A3Q00325 362 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms