RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CTIFO43310 598 aaKnown RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 TMCC2O75069 709 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SOX30O94993 753 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 TP53P04637 393 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SERPIND1P05546 499 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 MLNP12872 115 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 IVDP26440 423 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PPP2R1BP30154 601 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PIGAP37287 484 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 MC3RP41968 323 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 MAGEA3P43357 314 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PCYT1AP49585 367 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 AGFG1P52594 562 aaKnown RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 KCNJ2P63252 427 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 RNF4P78317 190 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 DUSP8Q13202 625 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 MPEG1Q2M385 716 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 C11orf91Q3C1V1 193 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PIGGQ5H8A4 983 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 AGTRAPQ6RW13 159 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SYDE1Q6ZW31 735 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 UBE2R2Q712K3 238 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 CENPUQ71F23 418 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 CREG2Q8IUH2 290 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF595Q8IYB9 648 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 CA13Q8N1Q1 262 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 NAT8LQ8N9F0 302 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 TRPV3Q8NET8 790 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PAQR8Q8TEZ7 354 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 KCNJ9Q92806 393 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SIGLEC10Q96LC7 697 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 ZFP3Q96NJ6 502 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SERPINB12Q96P63 405 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SLC30A3Q99726 388 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SFXN3Q9BWM7 321 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 UBTD1Q9HAC8 227 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PRTFDC1Q9NRG1 225 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF701Q9NV72 531 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-203ENST00000447360 GALNT8Q9NY28 637 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF226Q9NYT6 803 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 CNIH4Q9P003 139 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 PYCARDQ9ULZ3 195 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 TESMINQ9Y4I5 508 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 SCN3AQ9NY46 2000 aa6.5□□□□□ -1.37
LRRC28-203ENST00000447360 LRRC3CA6NJW4 275 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SDR42E2A6NKP2 422 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 A8MXE2 369 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 GOLGA8MH3BSY2 632 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TGFBR3LH3BV60 316 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 EIF1AYO14602 144 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 WIPF1O43516 503 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF354AO60765 605 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 LILRA1O75019 489 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 C1QAP02745 245 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SERPINA6P08185 405 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TMIGD3P0DMS9 266 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 OGNP20774 298 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CPA2P48052 419 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TRPC1P48995 793 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 FNTAP49354 379 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 RAB8AP61006 207 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 EEF1A1P68104 462 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SARNPP82979 210 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SLC13A2Q13183 592 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TNK1Q13470 666 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 NAE1Q13564 534 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CUL1Q13616 776 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CAPRIN1Q14444 709 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 ZNF791Q3KP31 576 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CHRFAM7AQ494W8 412 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 NHSL2Q5HYW2 709 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TBCELQ5QJ74 424 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 RNASEH2BQ5TBB1 312 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 EEF1A1P5Q5VTE0 462 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 PLEKHM3Q6ZWE6 761 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 LUZP2Q86TE4 346 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CILP2Q8IUL8 1156 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CCDC116Q8IYX3 515 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 DND1Q8IYX4 353 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SLC15A4Q8N697 577 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 OR14A16Q8NHC5 309 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 GIMAP7Q8NHV1 300 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 PTPMT1Q8WUK0 201 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 IGFBPL1Q8WX77 278 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 SNF8Q96H20 258 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 TRIB1Q96RU8 372 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 NAP1L3Q99457 506 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 NPLQ9BXD5 320 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 DDX47Q9H0S4 455 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 PIGMQ9H3S5 423 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 CXorf56Q9H5V9 222 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 PARVBQ9HBI1 364 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 INTS10Q9NVR2 710 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 C6orf203Q9P0P8 240 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 MRPS33Q9Y291 106 aaKnown RBP6.49□□□□□ -1.37
LRRC28-203ENST00000447360 MED16Q9Y2X0 877 aa6.49□□□□□ -1.37
LRRC28-203ENST00000447360 DHRS7Q9Y394 339 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms