RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CDK1P06493 297 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ACTR1BP42025 376 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ACTR1AP61163 376 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ELAVL3Q14576 367 aaKnown RBP15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ZNF563Q8TA94 476 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 LRR1Q96L50 414 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 KCNK6Q9Y257 313 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 PDCD5O14737 125 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 C8orf89P0DMQ9 161 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ACVR2AP27037 513 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 NRIP1P48552 1158 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 L3MBTL4Q8NA19 623 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 PSD4Q8NDX1 1056 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 LKAAEAR1Q8TD35 194 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 SORCS1Q8WY21 1168 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 ECHDC3Q96DC8 303 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 OR51I1Q9H343 314 aa15.91■□□□□ 0.14
TCOF1-206ENST00000445265 NMNAT1Q9HAN9 279 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-206ENST00000445265 GLOD5A6NK44 160 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 ANHXE9PGG2 379 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 CELP19835 753 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 TGFBR2P37173 567 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 DCDC1P59894 354 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 MAB21L1Q13394 359 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 CAMKVQ8NCB2 501 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 MKKSQ9NPJ1 570 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-206ENST00000445265 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 HSDL2Q6YN16 418 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 COMMD2Q86X83 199 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 OR8J2Q8NGG1 315 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 LYARQ9NX58 379 aaKnown RBP15.9■□□□□ 0.14
TCOF1-206ENST00000445265 AGAP5A6NIR3 686 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 NOS1APO75052 506 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-206ENST00000445265 ARL6IP5O75915 188 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 FHP07954 510 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 BMP8BP34820 402 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 MNDAP41218 407 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 TBRG1Q3YBR2 411 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 KHDRBS2Q5VWX1 349 aaKnown RBP15.9■□□□□ 0.14
TCOF1-206ENST00000445265 SYCE2Q6PIF2 218 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 ASB18Q6ZVZ8 466 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 ABHD13Q7L211 337 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 BMP8AQ7Z5Y6 402 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 NEIL2Q969S2 332 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 P2RY12Q9H244 342 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 ATAD5Q96QE3 1844 aa15.9■□□□□ 0.14
TCOF1-206ENST00000445265 RTCAO00442 366 aaKnown RBP15.89■□□□□ 0.14
TCOF1-206ENST00000445265 STATHP02808 62 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 ITPKBP27987 946 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 PTPRRQ15256 657 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 CATSPEREQ5SY80 951 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 PLAG1Q6DJT9 500 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 CCDC116Q8IYX3 515 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 TMEM5Q9Y2B1 443 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 IFT52Q9Y366 437 aa15.89■□□□□ 0.14
TCOF1-206ENST00000445265 TGM5O43548 720 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 CSF2P04141 144 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 RLN1P04808 185 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 TAS2R43P59537 309 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 IER5LQ5T953 404 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 SLC22A15Q8IZD6 547 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 RHOXF1Q8NHV9 184 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 HERVK_113Q902F9 699 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 ERVK13-1Q9NX77 482 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 ERVK-11Q9UQG0 969 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 MED31Q9Y3C7 131 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 KLK8O60259 260 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 CTSOP43234 321 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-206ENST00000445265 GRK6P43250 576 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 ZNF551Q7Z340 670 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-206ENST00000445265 GID4Q8IVV7 300 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 OR4K5Q8NGD3 323 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 ZBTB20Q9HC78 741 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-206ENST00000445265 DMRT3Q9NQL9 472 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 TLR9Q9NR96 1032 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 CNOT2Q9NZN8 540 aaKnown RBP15.89■□□□□ 0.13
TCOF1-206ENST00000445265 AASSQ9UDR5 926 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 FAM172BPA6NC97 362 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 TBPL2Q6SJ96 375 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.89■□□□□ 0.13
TCOF1-206ENST00000445265 NEIL3Q8TAT5 605 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 OR2B2Q9GZK3 357 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 PDFQ9HBH1 243 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 MYNNQ9NPC7 610 aa15.89■□□□□ 0.13
TCOF1-206ENST00000445265 SCN1AP35498 2009 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SLC9A3P48764 834 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 ELOAQ14241 798 aaKnown RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 TMEM35AQ53FP2 167 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 C22orf42Q6IC83 251 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 HSD11B1LQ7Z5J1 315 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 PCDHGA2Q9Y5H1 932 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 A0A1B0GTW7 788 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SMIM30A4D0T7 59 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 XKRYO14609 159 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 TAPBPO15533 448 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 EMC8O43402 210 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 C6P13671 934 aa15.88■□□□□ 0.13
TCOF1-206ENST00000445265 CLK3P49761 638 aaKnown RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 SMN1Q16637 294 aaKnown RBP15.88■□□□□ 0.13
TCOF1-206ENST00000445265 ALG11Q2TAA5 492 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms