RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 FOLH1Q04609 750 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 CSTF3Q12996 717 aaKnown RBP18.33■□□□□ 0.52
NELFE-206ENST00000444811 TUBA3CQ13748 450 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 RPUSD3Q6P087 351 aaKnown RBP18.33■□□□□ 0.52
NELFE-206ENST00000444811 TUBA3EQ6PEY2 450 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 RPS19BP1Q86WX3 136 aaKnown RBP18.33■□□□□ 0.52
NELFE-206ENST00000444811 LGI4Q8N135 537 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 ARMC10Q8N2F6 343 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 TMEM132CQ8N3T6 1108 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 TANKQ92844 425 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 VMP1Q96GC9 406 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 FAM111AQ96PZ2 611 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 BARD1Q99728 777 aaKnown RBP18.33■□□□□ 0.52
NELFE-206ENST00000444811 ACPTQ9BZG2 426 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 ASF1BQ9NVP2 202 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 MID2Q9UJV3 735 aa18.33■□□□□ 0.52
NELFE-206ENST00000444811 TRAV17A0A0B4J275 112 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 TRBV11-1A0A0K0K1C0 115 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 GLOD5A6NK44 160 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 GABRR3A8MPY1 467 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 ULK1O75385 1050 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 DDAH2O95865 285 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 TLX1P31314 330 aaPredicted RBP18.32■□□□□ 0.52
NELFE-206ENST00000444811 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
NELFE-206ENST00000444811 STT3AP46977 705 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 MLF1P58340 268 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 SRSF1Q07955 248 aaKnown RBP eCLIP18.32■□□□□ 0.522e-8■■□□□ 13.2
NELFE-206ENST00000444811 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 ZNF468Q5VIY5 522 aaPredicted RBP18.32■□□□□ 0.52
NELFE-206ENST00000444811 DGAT2L6Q6ZPD8 337 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 PAGE2Q7Z2X7 111 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 ZNF321PQ8N8H1 164 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 OR14A16Q8NHC5 309 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 TCP10LQ8TDR4 215 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 CHTF18Q8WVB6 975 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 GATA5Q9BWX5 397 aaPredicted RBP18.32■□□□□ 0.52
NELFE-206ENST00000444811 DEFB126Q9BYW3 111 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.32■□□□□ 0.52
NELFE-206ENST00000444811 ANKRD10Q9NXR5 420 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 VPS29Q9UBQ0 182 aa18.32■□□□□ 0.52
NELFE-206ENST00000444811 SERTM1A2A2V5 107 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 TMEM200CA6NKL6 621 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 C17orf105B2RV13 164 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 PGRMC2O15173 223 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 ALDH3A1P30838 453 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 CD96P40200 585 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 CFAP157Q5JU67 520 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 CCNYL2Q5T2Q4 361 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 SCIMPQ6UWF3 145 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 C1orf52Q8N6N3 182 aaKnown RBP18.31■□□□□ 0.52
NELFE-206ENST00000444811 MORN4Q8NDC4 146 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 MDS2Q8NDY4 140 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 DAZLQ92904 295 aaKnown RBP18.31■□□□□ 0.52
NELFE-206ENST00000444811 ZIM3Q96PE6 472 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 SIGLEC12Q96PQ1 595 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 MECRQ9BV79 373 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 IQCGQ9H095 443 aaKnown RBP18.31■□□□□ 0.52
NELFE-206ENST00000444811 ABI3Q9P2A4 366 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 COPG1Q9Y678 874 aaKnown RBP18.31■□□□□ 0.52
NELFE-206ENST00000444811 CLCA3PQ9Y6N3 262 aa18.31■□□□□ 0.52
NELFE-206ENST00000444811 UTP20O75691 2785 aaKnown RBP18.3■□□□□ 0.52
NELFE-206ENST00000444811 A0A1W2PS29 197 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 TYROBPO43914 113 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 PRAMEF2O60811 474 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 TRIM13O60858 407 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 GPR75O95800 540 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 UQCRFS1P47985 274 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 MAPK12P53778 367 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 RAE1P78406 368 aaKnown RBP18.3■□□□□ 0.52
NELFE-206ENST00000444811 HMGCS1Q01581 520 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 OR52E8Q6IFG1 317 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 GBP7Q8N8V2 638 aaPredicted RBP18.3■□□□□ 0.52
NELFE-206ENST00000444811 GALNT11Q8NCW6 608 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 C7orf57Q8NEG2 295 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 SLC2A12Q8TD20 617 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 ZNF721Q8TF20 911 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 PPWD1Q96BP3 646 aaKnown RBP18.3■□□□□ 0.52
NELFE-206ENST00000444811 TM4SF18Q96CE8 201 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 SMC6Q96SB8 1091 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 SHCBP1LQ9BZQ2 653 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 OR8D2Q9GZM6 311 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 NMRK1Q9NWW6 199 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 MAP10Q9P2G4 905 aa18.3■□□□□ 0.52
NELFE-206ENST00000444811 ARHGAP10A1A4S6 786 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 TCP11X1B4DZS4 312 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 H3BQF6 201 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 ALOX15P16050 662 aaPredicted RBP18.29■□□□□ 0.52
NELFE-206ENST00000444811 TNNI3P19429 210 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 SERPINB3P29508 390 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 PLIN5Q00G26 463 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 BIKQ13323 160 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 OR1C1Q15619 314 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 TNFAIP8L3Q5GJ75 292 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 NDUFAF5Q5TEU4 345 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 ATCAYQ86WG3 371 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 ST13P4Q8IZP2 240 aaPredicted RBP18.29■□□□□ 0.52
NELFE-206ENST00000444811 MMP21Q8N119 569 aa18.29■□□□□ 0.52
NELFE-206ENST00000444811 THAP3Q8WTV1 239 aaPredicted RBP18.29■□□□□ 0.52
NELFE-206ENST00000444811 C11orf24Q96F05 449 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms