RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ASB12Q8WXK4 309 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ISG20Q96AZ6 181 aaKnown RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 UTS2RQ9UKP6 389 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 GPR34Q9UPC5 381 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 A0A096LPI6 279 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PNMA8CA0A1B0GUJ8 204 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CHURC1-FNTBB4DL54 471 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RGS10O43665 173 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 EGFP01133 1207 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 DCNP07585 359 aaKnown RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 TNFRSF1BP20333 461 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HOXA9P31269 272 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 KDELR2P33947 212 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HSD17B2P37059 387 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 TAS2R41P59536 307 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HHEXQ03014 270 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RUNX1T1Q06455 604 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SPCS2Q15005 226 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 IRF4Q15306 451 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 MED22Q15528 200 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF77Q15935 545 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 NNATQ16517 81 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HMGCLL1Q8TB92 370 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RASSF5Q8WWW0 418 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 TFAP2CQ92754 450 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 JSRP1Q96MG2 331 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 APOOQ9BUR5 198 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SPATA5L1Q9BVQ7 753 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 P2RY12Q9H244 342 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RHCGQ9UBD6 479 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CRNNQ9UBG3 495 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CLCA3PQ9Y6N3 262 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CCDC182A6NF36 153 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TMEM150CB9EJG8 249 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TSPAN12O95859 305 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 B3GALT4O96024 378 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ITGA2P17301 1181 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 IL1RNP18510 177 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PAICSP22234 425 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 IL32P24001 234 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CDC42P60953 191 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CDK3Q00526 305 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 VMACQ2NL98 169 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 NFKBIDQ8NI38 313 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 STON2Q8WXE9 905 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PDLIM5Q96HC4 596 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PKP4Q99569 1192 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CPEB1Q9BZB8 566 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 LHPPQ9H008 270 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 RDH14Q9HBH5 336 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 C5AR2Q9P296 337 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 STOX2Q9P2F5 926 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF282Q9UDV7 671 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF225Q9UK10 706 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CNOT11Q9UKZ1 510 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 OR6C70A6NIJ9 312 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 FXYD1O00168 92 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 HOXC11O43248 304 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ALX3O95076 343 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CHRM5P08912 532 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 MPC1LP0DKB6 136 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TFPIP10646 304 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CSNK2A2P19784 350 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 AOAHP28039 575 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CSNK1EP49674 416 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TXNL4AP83876 142 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 SCARB2Q14108 478 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 NPTX1Q15818 432 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 IFI44LQ53G44 452 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ATG9BQ674R7 924 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF544Q6NX49 715 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 COX18Q8N8Q8 333 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 CAMKVQ8NCB2 501 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 RAB8BQ92930 207 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 EID2BQ96D98 161 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 MMABQ96EY8 250 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 COPS4Q9BT78 406 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 FOXQ1Q9C009 403 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 LCTP09848 1927 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 SAGE2PA6NJ88 616 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 OR7A10O76100 309 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 HLA-DQA2P01906 255 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 C9P02748 559 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 TP53P04637 393 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 C1GALT1C1LP0DN25 315 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PSKH1P11801 424 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 SHMT2P34897 504 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 MASP1P48740 699 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 RNF144AP50876 292 aaPredicted RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 OLR1P78380 273 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 SP140Q13342 867 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 LASP1Q14847 261 aaKnown RBP10.11□□□□□ -0.79
TOP3B-210ENST00000444502 GPR68Q15743 365 aa10.11□□□□□ -0.79
TOP3B-210ENST00000444502 PTCHD4Q6ZW05 846 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms