RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TBC1D29Q9UFV1 150 aa4.53□□□□□ -1.68
PTPN4-206ENST00000441089 MID2Q9UJV3 735 aa4.53□□□□□ -1.68
PTPN4-206ENST00000441089 PTBP2Q9UKA9 531 aaKnown RBP4.53□□□□□ -1.68
PTPN4-206ENST00000441089 PLAGL1Q9UM63 463 aa4.53□□□□□ -1.68
PTPN4-206ENST00000441089 SNX7Q9UNH6 387 aa4.53□□□□□ -1.68
PTPN4-206ENST00000441089 PSMD13Q9UNM6 376 aa4.53□□□□□ -1.68
PTPN4-206ENST00000441089 CFAP20Q9Y6A4 193 aaKnown RBP4.53□□□□□ -1.68
PTPN4-206ENST00000441089 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC189A1A4V9 331 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 GMNCA6NCL1 334 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 OR52A4PA6NMU1 304 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SYCE1LA8MT33 242 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 F8W8V4 182 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 STX16-NPEPL1H3BU86 382 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 MYO1CO00159 1063 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 STX16O14662 325 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SNX2O60749 519 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PRAMEF4O60810 478 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SMIM24O75264 130 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 LY6G6DO95868 133 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SCG5P05408 212 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 KLK3P07288 261 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 C8GP07360 202 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 RAB40ALP0C0E4 278 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 GFAPP14136 432 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 VCLP18206 1134 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 TSPAN8P19075 237 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 IMPDH1P20839 514 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 IMPA1P29218 277 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PRDX3P30048 256 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 HOXC12P31275 282 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ACTR1BP42025 376 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 GDF5P43026 501 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SLC6A12P48065 614 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SLC1A6P48664 564 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 DGKQP52824 942 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ALDH18A1P54886 795 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 KCNK10P57789 538 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ACTR1AP61163 376 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ABCE1P61221 599 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 HERVK_113P63132 956 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PLOD1Q02809 727 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 RPA4Q13156 261 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 STX3Q13277 289 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 RCN2Q14257 317 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FASTKQ14296 549 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF169Q14929 603 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PCBP2Q15366 365 aaKnown RBP eCLIP4.52□□□□□ -1.693e-6■■■■□ 22.2
PTPN4-206ENST00000441089 RPE65Q16518 533 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ARL13AQ5H913 290 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PRAMEF9Q5VWM5 478 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SULT1C3Q6IMI6 304 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 RPUSD3Q6P087 351 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SLC30A9Q6PML9 568 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ABRAXAS1Q6UWZ7 409 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FRMD7Q6ZUT3 714 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FRA10AC1Q70Z53 315 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 MAVSQ7Z434 540 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 GOLGA7Q7Z5G4 137 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 CAMKMTQ7Z624 323 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 KLHDC8AQ8IYD2 350 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 CCNYL1Q8N7R7 359 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF781Q8N8C0 355 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PPFIBP2Q8ND30 876 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 RAB3IL1Q8TBN0 382 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 LRRC8CQ8TDW0 803 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 TRPC4APQ8TEL6 797 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF483Q8TF39 744 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 UBTD2Q8WUN7 234 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SKA2Q8WVK7 121 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PATE1Q8WXA2 126 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 TFGQ92734 400 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FBXL8Q96CD0 374 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 MBD6Q96DN6 1003 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 THOC1Q96FV9 657 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FER1L6-AS2Q96M78 137 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 C12orf66Q96MD2 445 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 C7orf26Q96N11 449 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SECISBP2Q96T21 854 aaKnown RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ERVK-6Q9BXR3 956 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 SHCBP1LQ9BZQ2 653 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 DRC3Q9H069 523 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 FAM107BQ9H098 131 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ATG10Q9H0Y0 220 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 OSGEPL1Q9H4B0 414 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PNPOQ9NVS9 261 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PSD3Q9NYI0 1048 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 CD274Q9NZQ7 290 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 STOX2Q9P2F5 926 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF624Q9P2J8 865 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-206ENST00000441089 KCNN3Q9UGI6 736 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 HAO1Q9UJM8 370 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF225Q9UK10 706 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 PCTPQ9UKL6 214 aa4.52□□□□□ -1.69
PTPN4-206ENST00000441089 KCNE1BA0A087WTH5 132 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 A0A1W2PPV9 198 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 KLHL33A6NCF5 533 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 TLCD2A6NGC4 264 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms