RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PHC2Q8IXK0 858 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TCEAL8Q8IYN2 117 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 FAM46DQ8NEK8 389 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ATP6V1C2Q8NEY4 427 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PROKR2Q8NFJ6 384 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ADAMTS19Q8TE59 1207 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 SOSTQ9BQB4 213 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 GPR63Q9BZJ6 419 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 POLR2J2Q9GZM3 115 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 IL21Q9HBE4 155 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 THSD1Q9NS62 852 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 NLKQ9UBE8 527 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 RABL2BQ9UNT1 228 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CLCA3PQ9Y6N3 262 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TRAV19A0A0A6YYK7 116 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CBX4O00257 560 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 LYRM1O43325 122 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 HBQ1P09105 142 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TALDO1P37837 337 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 EPHB3P54753 998 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 SNRPGP62308 76 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 ABATP80404 500 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 RGS1Q08116 209 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 GGTA1PQ4G0N0 100 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 CDKL4Q5MAI5 379 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 LAS2Q8IYD9 372 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CLECL1Q8IZS7 167 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 C11orf65Q8NCR3 313 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 WFDC5Q8TCV5 224 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 AP3S1Q92572 193 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 AKAP1Q92667 903 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■■■□□ 18.3
LTBR-203ENST00000441074 GTPBP3Q969Y2 492 aaKnown RBP11.35□□□□□ -0.59
LTBR-203ENST00000441074 UPRTQ96BW1 309 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PLD4Q96BZ4 506 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 FCRL1Q96LA6 429 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 FAM129BQ96TA1 746 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 PPP1R3EQ9H7J1 279 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 CCL26Q9Y258 94 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 INSL6Q9Y581 213 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 U3KQ87 197 aa11.35□□□□□ -0.59
LTBR-203ENST00000441074 DNAH14Q0VDD8 3507 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 GPR39O43194 453 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 TSC22D2O75157 780 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 C8AP07357 584 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 CTSAP10619 480 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SRCP12931 536 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 COX7A2P14406 83 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 POU2F1P14859 743 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 TNFRSF1BP20333 461 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 ITGALP20701 1170 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 APEX1P27695 318 aaKnown RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 EVI2BP34910 448 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 CTNNB1P35222 781 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PBX2P40425 430 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 LIMS1P48059 325 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 HMGA2P52926 109 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 HTRA4P83105 476 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 RGNQ15493 299 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 TPGS1Q6ZTW0 290 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SERPINA9Q86WD7 417 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SYT12Q8IV01 421 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 GHDCQ8N2G8 530 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 Q8N402 240 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 ZBTB2Q8N680 514 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 SLC37A3Q8NCC5 494 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 LHFPL5Q8TAF8 219 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 MAL2Q969L2 176 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SH3KBP1Q96B97 665 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 TCEAL4Q96EI5 215 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 KLF16Q9BXK1 252 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 SPNS1Q9H2V7 528 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SLC32A1Q9H598 525 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PHF11Q9UIL8 331 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 CLEC4EQ9ULY5 219 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 VCANP13611 3396 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 SERTM1A2A2V5 107 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 I3L521 148 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 AGRPO00253 132 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 BTN3A3O00478 584 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PCDH17O14917 1159 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 YY2O15391 372 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 FZD6O60353 706 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 IL32P24001 234 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PTBP1P26599 531 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms