RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SCUBE1Q8IWY4 988 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 KBTBD2Q8IY47 623 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SIRT6Q8N6T7 355 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 BRIX1Q8TDN6 353 aaKnown RBP16.57■□□□□ 0.24
CCDC188-201ENST00000439765 IMMP1LQ96LU5 166 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 LPAR4Q99677 370 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 MRPL1Q9BYD6 325 aaKnown RBP16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SLC29A3Q9BZD2 475 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SLC12A4Q9UP95 1085 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 MRPS33Q9Y291 106 aaKnown RBP16.57■□□□□ 0.24
CCDC188-201ENST00000439765 FIS1Q9Y3D6 152 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
CCDC188-201ENST00000439765 TTLL8A6PVC2 850 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 TGFBR3LH3BV60 316 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 DPM1O60762 260 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 SEMA3DO95025 777 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 TGDSO95455 350 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 BSGP35613 385 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 TSFMP43897 325 aaKnown RBP16.56■□□□□ 0.24
CCDC188-201ENST00000439765 HTR6P50406 440 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 HK2P52789 917 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 SRSF1Q07955 248 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC188-201ENST00000439765 ACTN3Q08043 901 aaPredicted RBP16.56■□□□□ 0.24
CCDC188-201ENST00000439765 NUDT13Q86X67 352 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 ZBTB20Q9HC78 741 aaPredicted RBP16.56■□□□□ 0.24
CCDC188-201ENST00000439765 C5AR2Q9P296 337 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 PPT2Q9UMR5 302 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 MMACHCQ9Y4U1 282 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 DNAJC15Q9Y5T4 150 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 POLEQ07864 2286 aa16.56■□□□□ 0.24
CCDC188-201ENST00000439765 A0A0A6YYD5 115 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 TCRBV16S1A1N1A0A5B0 115 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 SLCO1B7G3V0H7 640 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 MANBAO00462 879 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 CLDN4O14493 209 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 TMPRSS11DO60235 418 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 PRKRAO75569 313 aaKnown RBP16.55■□□□□ 0.24
CCDC188-201ENST00000439765 KRT6AP02538 564 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 KRT6BP04259 564 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 SERPINA7P05543 415 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 ITGAMP11215 1152 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 CPN2P22792 545 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 PPP2R1BP30154 601 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 KRT6CP48668 564 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 HNRNPH2P55795 449 aaKnown RBP16.55■□□□□ 0.24
CCDC188-201ENST00000439765 HSD17B7P56937 341 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 AGAP7PQ5VUJ5 663 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 PLAG1Q6DJT9 500 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 CYP20A1Q6UW02 462 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 WDR75Q8IWA0 830 aaKnown RBP16.55■□□□□ 0.24
CCDC188-201ENST00000439765 ZNF595Q8IYB9 648 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 ZCCHC7Q8N3Z6 543 aaKnown RBP16.55■□□□□ 0.24
CCDC188-201ENST00000439765 FAM26EQ8N5C1 309 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 AGAP4Q96P64 663 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 MFRPQ9BY79 579 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 PTGFRNQ9P2B2 879 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 VTI1BQ9UEU0 232 aa16.55■□□□□ 0.24
CCDC188-201ENST00000439765 MYOCOSA0A1B0GUC4 107 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 A8MUA0 341 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 LDB3O75112 727 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ULK1O75385 1050 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CHEK2O96017 543 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 DRD4P21917 467 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ARFIP1P53367 373 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 TNFRSF17Q02223 184 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ID2Q02363 134 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 LINC00696Q6ZRV3 163 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 RIPOR1Q6ZS17 1223 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 GPR180Q86V85 440 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CPT1CQ8TCG5 803 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 TWIST2Q8WVJ9 160 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 DDX31Q9H8H2 851 aaKnown RBP16.54■□□□□ 0.24
CCDC188-201ENST00000439765 BRF2Q9HAW0 419 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 PSD3Q9NYI0 1048 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 LUZP4Q9P127 313 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 PHF11Q9UIL8 331 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ATG4BQ9Y4P1 393 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CLDN16Q9Y5I7 305 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CYSRT1A8MQ03 144 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ZNF195O14628 629 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 HDAC3O15379 428 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 MYO1DO94832 1006 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 SLC26A5P58743 744 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 ZNF33BQ06732 778 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 EXT1Q16394 746 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 B3GNTL1Q67FW5 361 aaPredicted RBP16.54■□□□□ 0.24
CCDC188-201ENST00000439765 C18orf63Q68DL7 685 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 JMJD6Q6NYC1 403 aaPredicted RBP16.54■□□□□ 0.24
CCDC188-201ENST00000439765 SCIMPQ6UWF3 145 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 RNF165Q6ZSG1 346 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 COMMD6Q7Z4G1 85 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 CPLX4Q7Z7G2 160 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 RBMXL3Q8N7X1 1067 aaKnown RBP16.54■□□□□ 0.24
CCDC188-201ENST00000439765 Q8NA96 180 aa16.54■□□□□ 0.24
CCDC188-201ENST00000439765 PSMF1Q92530 271 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms