RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 MGAT4AQ9UM21 535 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 V9GYH0 126 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 NYNRINQ9P2P1 1898 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 LOC105369274A0A096LPK9 316 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 H7C0S8 307 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 RTCAO00442 366 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 PRMT3O60678 531 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 RAB36O95755 333 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 SLC16A8O95907 504 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 OSMP13725 252 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ATP1B2P14415 290 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 RHCEP18577 417 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CPN2P22792 545 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CTBP2P56545 445 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 PTSQ03393 145 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ZNF763Q0D2J5 394 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 HYAL2Q12891 473 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ZNF791Q3KP31 576 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 SLC35F1Q5T1Q4 408 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 SPRYD7Q5W111 196 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CHMP1BQ7LBR1 199 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 MRPL10Q7Z7H8 261 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 RBM45Q8IUH3 476 aaKnown RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 OR4N4Q8N0Y3 316 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 CHCHD4Q8N4Q1 142 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 UXS1Q8NBZ7 420 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 NLGN4YQ8NFZ3 816 aaPredicted RBP8.64□□□□□ -1.03
COPB1-202ENST00000439561 OR8J1Q8NGP2 316 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 REPS1Q96D71 796 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 FCRL4Q96PJ5 515 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 ASIC5Q9NY37 505 aa8.64□□□□□ -1.03
COPB1-202ENST00000439561 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 M0R3H8 397 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 POLR1CO15160 346 aaPredicted RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 SGTAO43765 313 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 STATHP02808 62 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ALPPL2P10696 532 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 CSNK1DP48730 415 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 MAP4K2Q12851 820 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ZNF630Q2M218 657 aaPredicted RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 YIF1BQ5BJH7 314 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 TXNDC8Q6A555 127 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 BICRALQ6AI39 1079 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 COMMD6Q7Z4G1 85 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 SERINC5Q86VE9 423 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 SLC30A8Q8IWU4 369 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 LILRA3Q8N6C8 439 aaPredicted RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 BEST4Q8NFU0 473 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 OR8J2Q8NGG1 315 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ZFAND1Q8TCF1 268 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 WFDC5Q8TCV5 224 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
COPB1-202ENST00000439561 CDCA4Q9BXL8 241 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 TEX12Q9BXU0 123 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ABCG5Q9H222 651 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ASAH2Q9NR71 780 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 H7C4K7 107 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 FABP7O15540 132 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ERAL1O75616 437 aaKnown RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 OR7A10O76100 309 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 IL3P08700 152 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 HBQ1P09105 142 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 NAT1P18440 290 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 IDSP22304 550 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 PPP2R1BP30154 601 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 DGKGP49619 791 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 GZMKP49863 264 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ACLYP53396 1101 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 AP1S2P56377 157 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 SNRPD1P62314 119 aaKnown RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 KCNA10Q16322 511 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ZNF385BQ569K4 471 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 CLLU1OSQ5K130 101 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 REEP3Q6NUK4 255 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 CRTC1Q6UUV9 634 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 MSANTD1Q6ZTZ1 278 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 Q6ZVL8 140 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ATCAYQ86WG3 371 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 PLCZ1Q86YW0 608 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
COPB1-202ENST00000439561 MMP21Q8N119 569 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 C2orf69Q8N8R5 385 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 FBXO22Q8NEZ5 403 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 OR52N2Q8NGI0 321 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 WDR48Q8TAF3 677 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 SPATA9Q9BWV2 254 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 RDH14Q9HBH5 336 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 EQTNQ9NQ60 294 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 ZFR2Q9UPR6 939 aaKnown RBP8.63□□□□□ -1.03
COPB1-202ENST00000439561 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
COPB1-202ENST00000439561 HYKKA2RU49 373 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ZNF840PA6NDX5 716 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SYN3O14994 580 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ADAM12O43184 909 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 EEF1E1O43324 174 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 PRAMEF4O60810 478 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CBSLP0DN79 551 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ARSBP15848 533 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms