RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 EHD1Q9H4M9 534 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ZNF222Q9UK12 451 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 FKBP7Q9Y680 259 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 TEX264Q9Y6I9 313 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 SLC15A1P46059 708 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 SPIN3Q5JUX0 258 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 REEP3Q6NUK4 255 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 MPP4Q96JB8 637 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 CDX2Q99626 313 aaPredicted RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 UTP23Q9BRU9 249 aaKnown RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 CUTCQ9NTM9 273 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 GNG8Q9UK08 70 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ANXA8P13928 327 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 VBP1P61758 197 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 FOLH1Q04609 750 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ASTE1Q2TB18 679 aaPredicted RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 SLC35F1Q5T1Q4 408 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 KLHL36Q8N4N3 616 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 IL17RCQ8NAC3 791 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 LRTOMTQ8WZ04 291 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 LRRC58Q96CX6 371 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 UCK2Q9BZX2 261 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 TMPRSS11EQ9UL52 423 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 TMEM5Q9Y2B1 443 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 SH3D21A4FU49 640 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 SLC16A8O95907 504 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 OR1D4P47884 311 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ARSDP51689 593 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 EMX2Q04743 252 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 TPRG1LQ5T0D9 272 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 MANEALQ5VSG8 457 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ZNF765Q7L2R6 523 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 RTN4RL1Q86UN2 441 aaPredicted RBP11.56□□□□□ -0.56
NEK1-201ENST00000439128 PQLC1Q8N2U9 271 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 IFI44Q8TCB0 444 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 CST11Q9H112 138 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 GPRC5BQ9NZH0 403 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 GIMAP2Q9UG22 337 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 FETUBQ9UGM5 382 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 NAALAD2Q9Y3Q0 740 aa11.56□□□□□ -0.56
NEK1-201ENST00000439128 ITGA10O75578 1167 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 F10P00742 488 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ALDOAP04075 364 aaKnown RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 HK1P19367 917 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 HOXA9P31269 272 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TPMTP51580 245 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 NSMAFQ92636 917 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 OR5B2Q96R09 309 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 IL26Q9NPH9 171 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 THAP10Q9P2Z0 257 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 VDAC3Q9Y277 283 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 DRGXA6NNA5 263 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 EDN1P05305 212 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 CD79AP11912 226 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 CDKN2DP55273 166 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 MXD1Q05195 221 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TIGD6Q17RP2 521 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 AKIRIN2Q53H80 203 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 LPCAT4Q643R3 524 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ADNP2Q6IQ32 1131 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 OR5K1Q8NHB7 308 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 EBF4Q9BQW3 602 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TSSK6Q9BXA6 273 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 TM7SF3Q9NS93 570 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 STOX2Q9P2F5 926 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 TNFRSF10DQ9UBN6 386 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 GGT3PA6NGU5 568 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ZBTB42B2RXF5 422 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ZNF821O75541 412 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 ICAM2P13598 275 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SMSP52788 366 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 GPR107Q5VW38 600 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 PGAP3Q96FM1 320 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 TIMM29Q9BSF4 260 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 NFS1Q9Y697 457 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 AREL1O15033 823 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 H2BFMP0C1H6 154 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 FUT4P22083 530 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 CLCN2P51788 898 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 ELF3P78545 371 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 SPEM2Q0P670 501 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 CENPNQ96H22 339 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 NSUN5Q96P11 429 aaKnown RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 ZNF382Q96SR6 550 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 DYNLRB1Q9NP97 96 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SMPD3Q9NY59 655 aaPredicted RBP11.55□□□□□ -0.56
NEK1-201ENST00000439128 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 SPEF1Q9Y4P9 236 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 PSAT1Q9Y617 370 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 CCDC182A6NF36 153 aa11.55□□□□□ -0.56
NEK1-201ENST00000439128 J3QLW9 94 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms