RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 HMGB4Q8WW32 186 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 RORBQ92753 470 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 DOHHQ9BU89 302 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM184CQ9NVA4 438 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 TAC3Q9UHF0 121 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 PLEKHM1Q9Y4G2 1056 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 POM121BA6NF01 834 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 RTCAO00442 366 aaKnown RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 FADS2O95864 444 aaKnown RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 KELP23276 732 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 PSMB5P28074 263 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CD40LGP29965 261 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CHI3L1P36222 383 aaPredicted RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 TFF2Q03403 129 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC5A12Q1EHB4 618 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 ATAD3BQ5T9A4 648 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 Q6ZPB1 254 aaPredicted RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 OR5K2Q8NHB8 316 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 FBLIM1Q8WUP2 373 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CTRCQ99895 268 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 ITGB1BP2Q9UKP3 347 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 H0Y8X5 98 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 C9P02748 559 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 PRIM2P49643 509 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 DMPKQ09013 629 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SCARB2Q14108 478 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 TEAD4Q15561 434 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 DGUOKQ16854 277 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM71E1Q6IPT2 247 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 CCDC80Q76M96 950 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 TSEN54Q7Z6J9 526 aaKnown RBP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 CXorf40BQ96DE9 158 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 ZNF300Q96RE9 604 aaPredicted RBP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 TIMM29Q9BSF4 260 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SPATA9Q9BWV2 254 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SLIRPQ9GZT3 109 aaKnown RBP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 BTBD1Q9H0C5 482 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 FGF22Q9HCT0 170 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 MIEF1Q9NQG6 463 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 NDUFAF4Q9P032 175 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 ACSL5Q9ULC5 683 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 GPSM3Q9Y4H4 160 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SNX8Q9Y5X2 465 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 PI15O43692 258 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 TNFRSF21O75509 655 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 KCNK2O95069 426 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 RPN2P04844 631 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SRFP11831 508 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 ACVR2AP27037 513 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SELENOWP63302 87 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 KEAP1Q14145 624 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 GCNT6Q5T4J0 391 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 KIAA1614Q5VZ46 1190 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 P2RY8Q86VZ1 359 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 METTL4Q8N3J2 472 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 ZNF540Q8NDQ6 660 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 S100ZQ8WXG8 99 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 APOL4Q9BPW4 351 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 MYNNQ9NPC7 610 aa13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 CUEDC1Q9NWM3 386 aaPredicted RBP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
PTCHD3-201ENST00000438700 FEZF1A0PJY2 475 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 TBX1O43435 398 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 GPR37L1O60883 481 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 MT-ND2P03891 347 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 ALOX5P09917 674 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 NPRL3Q12980 569 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 TDGQ13569 410 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 PDE7AQ13946 482 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 CLCA4Q14CN2 919 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 SMAD2Q15796 467 aaKnown RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 OR52N2Q8NGI0 321 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 ASB12Q8WXK4 309 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 ZNF566Q969W8 418 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 YIPF6Q96EC8 236 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 C12orf66Q96MD2 445 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 INSM2Q96T92 566 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 DSN1Q9H410 356 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC2A4RGQ9NR83 387 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 FBXO8Q9NRD0 319 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 PADI2Q9Y2J8 665 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms