RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 E9PMD0 336 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 H3BQV1 296 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TULP2O00295 520 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ITGB1BP1O14713 200 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPAA1O43292 621 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 COCHO43405 550 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SPRY2O43597 315 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NME2P1O60361 137 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 STX11O75558 287 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SEMA3DO95025 777 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LUC7L3O95232 432 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 AHSA1O95433 338 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TOP3BO95985 862 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MBPP02686 304 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 C9P02748 559 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MT-ND2P03891 347 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CHRNGP07510 517 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FGF5P12034 268 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCNB1P14635 433 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CPN1P15169 458 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GNSP15586 552 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MATN1P21941 496 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCNOP22674 350 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMB6P28072 239 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 IL12BP29460 328 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRCPP42785 496 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TNFRSF4P43489 277 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 KCNJ3P48549 501 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LHX1P48742 406 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCT3P49368 545 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDC34P49427 236 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 AGTR2P50052 363 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TPMTP51580 245 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADPRHP54922 357 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAE1P78406 368 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SORDQ00796 357 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MYBPC1Q00872 1141 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CFHR1Q03591 330 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FOXM1Q08050 763 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SREBF2Q12772 1141 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PMS2P3Q13401 168 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 STIM1Q13586 685 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 KLF9Q13886 244 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GCKRQ14397 625 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RY14Q15391 338 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC5A12Q1EHB4 618 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TCTN1Q2MV58 587 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 UGT3A2Q3SY77 523 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM153CQ494X1 144 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 KLHL22Q53GT1 634 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LACTB2Q53H82 288 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 XKR4Q5GH76 650 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 C6orf183Q5T699 404 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RNLSQ5VYX0 342 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF626Q68DY1 528 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RNASEKQ6P5S7 137 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLXDC2Q6UX71 529 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF517Q6ZMY9 492 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 IL17RELQ6ZVW7 336 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMPRSS9Q7Z410 1059 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MDGA2Q7Z553 956 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CYP4Z1Q86W10 505 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLCZ1Q86YW0 608 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC35F3Q8IY50 421 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CADM3Q8N126 398 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LNX2Q8N448 690 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRRC17Q8N6Y2 441 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF611Q8N823 705 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 EXD3Q8N9H8 876 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SRFBP1Q8NEF9 429 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RHEBL1Q8TAI7 183 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CAPSLQ8WWF8 208 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ATG4AQ8WYN0 398 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ST8SIA1Q92185 356 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIGCQ92535 297 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ELMO1Q92556 727 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PHYHIPQ92561 330 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NRGNQ92686 78 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GGHQ92820 318 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GLG1Q92896 1179 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MOB3AQ96BX8 217 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ASB9Q96DX5 294 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MARS2Q96GW9 593 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 MED30Q96HR3 178 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLEKHA8Q96JA3 519 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 TIMP4Q99727 224 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 C17orf62Q9BQA9 187 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPCDQ9BVM2 203 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FNDC11Q9BVV2 318 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FSD1LQ9BXM9 530 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NLNQ9BYT8 704 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SEMA4CQ9C0C4 833 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ROGDIQ9GZN7 287 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAB1BQ9H0U4 201 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLPH3Q9H4A6 298 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms