RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MAPK3P27361 379 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 MARCKSP29966 332 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 SFNP31947 248 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 GEMP55040 296 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 STARD6P59095 220 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 GABPAQ06546 454 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 PAX8Q06710 450 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 CARTPTQ16568 116 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 SNAI3Q3KNW1 292 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCDC40Q4G0X9 1142 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 PARP10Q53GL7 1025 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 FAM182AQ5T1J6 154 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 PLPP4Q5VZY2 271 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 MFSD7Q6UXD7 560 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 CDHR3Q6ZTQ4 885 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 CYP4V2Q6ZWL3 525 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 GET4Q7L5D6 327 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 CACUL1Q86Y37 369 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 KIAA1524Q8TCG1 905 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 FUNDC2Q9BWH2 189 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 KRT23Q9C075 422 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 KCNK13Q9HB14 408 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 DDX28Q9NUL7 540 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 MED17Q9NVC6 651 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 COPS7AQ9UBW8 275 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 HOOK1Q9UJC3 728 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 MRTO4Q9UKD2 239 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 KLK13Q9UKR3 277 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 TSPAN16Q9UKR8 245 aa3.02□□□□□ -1.93
TRAPPC13-204ENST00000438419 NOTCH3Q9UM47 2321 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 RNF103-CHMP3A0A140T963 221 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 A8MU76 341 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 A8MXK9 166 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 EEF2KO00418 725 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 SNAP91O60641 907 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FGF19O95750 216 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 HPRP00739 348 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 SFTPBP07988 381 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CYP3A5P20815 502 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 GPX3P22352 226 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 OXTRP30559 389 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FCGR2BP31994 310 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FCGR2CP31995 323 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 RABIFP47224 123 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 TAF6P49848 677 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CRYBA2P53672 197 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 SLC8A3P57103 927 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 BPIFB3P59826 476 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FKBP3Q00688 224 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 TRADDQ15628 312 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 MLF2Q15773 248 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 WSCD2Q2TBF2 565 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 OR6B2Q6IFH4 312 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CAPN13Q6MZZ7 669 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 WDR88Q6ZMY6 472 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 C1orf186Q6ZWK4 172 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 RNF130Q86XS8 419 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 PHC2Q8IXK0 858 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 Q8N377 158 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 LEMD2Q8NC56 503 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 SPPL2AQ8TCT8 520 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FAM222BQ8WU58 562 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CHPT1Q8WUD6 406 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 C11orf52Q96A22 123 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 SLCO4A1Q96BD0 722 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 MRPL53Q96EL3 112 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 PCED1BQ96HM7 432 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 NSMCE2Q96MF7 247 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 S1PR3Q99500 378 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 ATF6BQ99941 703 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZNF577Q9BSK1 485 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 PINK1Q9BXM7 581 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 NUSAP1Q9BXS6 441 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 TUBB1Q9H4B7 451 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 NINJ2Q9NZG7 142 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 THAP10Q9P2Z0 257 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CTSZQ9UBR2 303 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 TRIM10Q9UDY6 481 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 FAM153AQ9UHL3 310 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 NARFQ9UHQ1 456 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCPG1Q9ULG6 757 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 ISY1Q9ULR0 285 aaKnown RBP3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 NUDCQ9Y266 331 aa3.01□□□□□ -1.93
TRAPPC13-204ENST00000438419 PCNX3Q9H6A9 2034 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 TDRD15B5MCY1 1934 aaKnown RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 IGLV4-3A0A075B6K6 122 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 IGKV3D-20A0A0C4DH25 116 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CFAP73A6NFT4 308 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ARHGAP42A6NI28 874 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 SHISA7A6NL88 538 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 PI15O43692 258 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 POP4O95707 220 aaKnown RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ANGPTL1O95841 491 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 MT-ATP6P00846 226 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ADORA3P0DMS8 318 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CT45A8P0DMV1 189 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CT45A9P0DMV2 189 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ETS1P14921 441 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCR4P51679 360 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms