RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CTNSO60931 367 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 OR6B1O95007 311 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ZWINTO95229 277 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 CCDC166P0CW27 439 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SMIM10L1P0DMW3 83 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PCNAP12004 261 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ACVR2AP27037 513 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SERPINB1P30740 379 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 TLX1P31314 330 aaPredicted RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 SOX3P41225 446 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 MSH2P43246 934 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SLC6A12P48065 614 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 HSPA7P48741 367 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 GPR143P51810 404 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 LIM2P55344 173 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 KCNJ2P63252 427 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PHEXP78562 749 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PMPCAQ10713 525 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 RUNX2Q13950 521 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SLMAPQ14BN4 828 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 FASTKD3Q14CZ7 662 aaKnown RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 CDSNQ15517 529 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 AP5B1Q2VPB7 878 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 C18orf21Q32NC0 220 aaPredicted RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 TMEM35AQ53FP2 167 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 CDKL4Q5MAI5 379 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ABHD17CQ6PCB6 329 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 B3GNT6Q6ZMB0 384 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 LRRC70Q7Z2Q7 622 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 FGD2Q7Z6J4 655 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 CTAGE6Q86UF2 777 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ZNF227Q86WZ6 799 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 CCDC71Q8IV32 467 aaPredicted RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 CTAGE3PQ8IX95 158 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 FAM109AQ8N4B1 249 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 OR5M9Q8NGP3 310 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 LILRB4Q8NHJ6 448 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 C16orf52Q8NHV5 167 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SLC22A8Q8TCC7 542 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ANKRD49Q8WVL7 239 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ANP32BQ92688 251 aaKnown RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 SMIM10Q96HG1 83 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ART5Q96L15 291 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 NSUN5Q96P11 429 aaKnown RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 DGAT2Q96PD7 388 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 F2RL3Q96RI0 385 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 RASL10BQ96S79 203 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 NAPGQ99747 312 aaPredicted RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 CPNE1Q99829 537 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 TBCDQ9BTW9 1192 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ALOXE3Q9BYJ1 711 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 TTTY12Q9BZ98 90 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 NT5DC2Q9H857 520 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PLAC1Q9HBJ0 212 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 LYRM4Q9HD34 91 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SACM1LQ9NTJ5 587 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 IKZF3Q9UKT9 509 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ACAD8Q9UKU7 415 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 DAPP1Q9UN19 280 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PPIEQ9UNP9 301 aaKnown RBP7.2□□□□□ -1.26
VPS50-204ENST00000438395 RNF6Q9Y252 685 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ANGPTL3Q9Y5C1 460 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 SCN3AQ9NY46 2000 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 MYOCOSA0A1B0GUC4 107 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ATP6AP2A0A1C7CYW4 349 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 NKX2-6A6NCS4 301 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SUPT3HB4E1H0 165 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 OR10H2O60403 315 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SUPT3HO75486 399 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ATP6AP2O75787 350 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 CD1EP15812 388 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 POU3F2P20265 443 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 CPN2P22792 545 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 IVDP26440 423 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 GP5P40197 560 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ARL1P40616 181 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 MAN2A2P49641 1150 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 HNRNPFP52597 415 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 HK2P52789 917 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ID2Q02363 134 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 TBL3Q12788 808 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 CHIT1Q13231 466 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 DDX39BQ13838 428 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 DOC2AQ14183 400 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ADPRMQ3LIE5 342 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 FBXO48Q5FWF7 155 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 NKAPLQ5M9Q1 402 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 WLSQ5T9L3 541 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 C6orf163Q5TEZ5 329 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 CES4AQ5XG92 561 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 MED27Q6P2C8 311 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 ZNF585AQ6P3V2 769 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 C16orf47Q6ZP98 133 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 TBC1D1Q86TI0 1168 aaPredicted RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 CHERPQ8IWX8 916 aaKnown RBP7.19□□□□□ -1.26
VPS50-204ENST00000438395 LIX1Q8N485 282 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 SPATA6LQ8N4H0 392 aa7.19□□□□□ -1.26
VPS50-204ENST00000438395 GOLM1Q8NBJ4 401 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms