RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 GK5Q6ZS86 529 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 ABHD13Q7L211 337 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 GPALPP1Q8IXQ4 340 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 FAM109AQ8N4B1 249 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 GIMAP7Q8NHV1 300 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 SPATA3Q8NHX4 192 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 MZB1Q8WU39 189 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 KCNJ9Q92806 393 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 SARAFQ96BY9 339 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 AARSD1Q9BTE6 412 aaKnown RBP13.05□□□□□ -0.32
LINC01088-201ENST00000437737 IQCGQ9H095 443 aaKnown RBP13.05□□□□□ -0.32
LINC01088-201ENST00000437737 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
LINC01088-201ENST00000437737 DCDC2Q9UHG0 476 aa13.05□□□□□ -0.32
LINC01088-201ENST00000437737 MPDZO75970 2070 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 A0A087X1B8 175 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 IGKV3D-11A0A0A0MRZ8 115 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 A0A1B0GVC2 190 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 ATP6AP2A0A1C7CYW4 349 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 HMX2A2RU54 273 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 SYT5O00445 386 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 OR1F1O43749 312 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 ATP6AP2O75787 350 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 LY6G6DO95868 133 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 GSTA1P08263 222 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 SLC18A1P54219 525 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 NKX6-1P78426 367 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 SLC18A2Q05940 514 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 RGS1Q08116 209 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 BMPR2Q13873 1038 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 RIPPLY2Q5TAB7 128 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 C16orf47Q6ZP98 133 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 CXXC5Q7LFL8 322 aaKnown RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 NCLNQ969V3 563 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 FAM173AQ9BQD7 235 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 CNPPD1Q9BV87 410 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 PNO1Q9NRX1 252 aaKnown RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-201ENST00000437737 GRID1Q9ULK0 1009 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 ACOT9Q9Y305 439 aa13.04□□□□□ -0.32
LINC01088-201ENST00000437737 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 HSPB2A8KAH6 182 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 H3BQF6 201 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 COPEO14579 308 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 OR2J2O76002 312 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 ZFAND5O76080 213 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 GLSO94925 669 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 OR6B1O95007 311 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 PYGBP11216 843 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 RNH1P13489 461 aaKnown RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 GABRA1P14867 456 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 SAT1P21673 171 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 BMP5P22003 454 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 MAGEA12P43365 314 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 ASCL1P50553 236 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 DCAF7P61962 342 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 NAE1Q13564 534 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 PWP1Q13610 501 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 DAZAP2Q15038 168 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 HSPB2Q16082 182 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 CYHR1Q6ZMK1 362 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 PIWIL4Q7Z3Z4 852 aaKnown RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 TBC1D1Q86TI0 1168 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 CPNE9Q8IYJ1 553 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 TBC1D19Q8N5T2 526 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 RELL2Q8NC24 303 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 RNASE6Q93091 150 aaKnown RBP13.03□□□□□ -0.32
LINC01088-201ENST00000437737 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 IL1RL2Q9HB29 575 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 KCNK9Q9NPC2 374 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
LINC01088-201ENST00000437737 A0A096LPK6 155 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 DVL2O14641 736 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TM9SF1O15321 606 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 SUSD5O60279 629 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 GLRA3O75311 464 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 C2P06681 752 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 F7P08709 466 aaPredicted RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 CELA3AP09093 270 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 CNR1P21554 472 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms