RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 EID3Q8N140 333 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 UBTD2Q8WUN7 234 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ANP32BQ92688 251 aaKnown RBP12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 UBE2E3Q969T4 207 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 DGAT2Q96PD7 388 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ENKD1Q9H0I2 346 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 TP63Q9H3D4 680 aaPredicted RBP12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 SEMA4BQ9NPR2 832 aaPredicted RBP12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 PNPLA3Q9NST1 481 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 COPS7AQ9UBW8 275 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 ANGPTL3Q9Y5C1 460 aa12.12□□□□□ -0.47
CDCA4P4-201ENST00000435216 HMX2A2RU54 273 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 GLOD5A6NK44 160 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SCELO95171 688 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 C2P06681 752 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 GFAPP14136 432 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 CNR1P21554 472 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SSTR2P30874 369 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 PIGAP37287 484 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 STT3AP46977 705 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 NUP107P57740 925 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 RPS13P62277 151 aaKnown RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 CAV1Q03135 178 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 FOLH1Q04609 750 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 TLE4Q04727 773 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 PMPCAQ10713 525 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 PFKFB4Q16877 469 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 GXYLT1Q4G148 440 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SYT10Q6XYQ8 523 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 OR5L2Q8NGL0 311 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 OR5M3Q8NGP4 307 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 OR8K3Q8NH51 312 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 CHTF18Q8WVB6 975 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 RGMAQ96B86 450 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SENP5Q96HI0 755 aaPredicted RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SMC6Q96SB8 1091 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SPOCK3Q9BQ16 436 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 RPF2Q9H7B2 306 aaKnown RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 DMRT3Q9NQL9 472 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 SACM1LQ9NTJ5 587 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 HCFC1P51610 2035 aa12.11□□□□□ -0.47
CDCA4P4-201ENST00000435216 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 NCKAP5O14513 1909 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 ATP6AP2A0A1C7CYW4 349 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 EEDO75530 441 aaKnown RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 ATP6AP2O75787 350 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 LRATO95237 230 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 IGKV3-11P04433 115 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 COX7A2P14406 83 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 PIK3CGP48736 1102 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 TNFRSF17Q02223 184 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 FOXO1Q12778 655 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 PRAMEF20Q5VT98 475 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 TMEM211Q6ICI0 200 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 PAOXQ6QHF9 649 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 OPN5Q6U736 354 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 GK5Q6ZS86 529 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 GPR180Q86V85 440 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 RND1Q92730 232 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 UCN3Q969E3 161 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 RBM18Q96H35 190 aaKnown RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 GAL3ST4Q96RP7 486 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 CNPPD1Q9BV87 410 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 ACTR8Q9H981 624 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 SNX15Q9NRS6 342 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 CPSF2Q9P2I0 782 aaKnown RBP12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
CDCA4P4-201ENST00000435216 A0A087X1B8 175 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 A0A1W2PS29 197 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 TMPRSS11DO60235 418 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 NADKO95544 446 aaPredicted RBP12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 GBAP04062 536 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 P04436 131 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 SERPINB1P30740 379 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 CHRNB4P30926 498 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 NEK2P51955 445 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 HERVK_113P63132 956 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 ERVK-8P63133 956 aa12.09□□□□□ -0.47
CDCA4P4-201ENST00000435216 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms