RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 KIF18AQ8NI77 898 aa20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 DOK4Q8TEW6 326 aa20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 PPWD1Q96BP3 646 aaKnown RBP20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 DGAT2Q96PD7 388 aa20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 TP63Q9H3D4 680 aaPredicted RBP20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 ZDHHC11Q9H8X9 412 aa20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 SNX15Q9NRS6 342 aa20.19■□□□□ 0.82
RPUSD3-206ENST00000433535 CSMD2Q7Z408 3487 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 A0A087X1B8 175 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 HMX2A2RU54 273 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 SYCE1LA8MT33 242 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 HRKO00198 91 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 C2P06681 752 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 CCL3P10147 92 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 GFAPP14136 432 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 COX7A2P14406 83 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 STT3AP46977 705 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 DNASE1L1P49184 302 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 SLC7A5Q01650 507 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 GUCY2DQ02846 1103 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 FOLH1Q04609 750 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 ASPHQ12797 758 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 UAP1Q16222 522 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 UBAP2Q5T6F2 1119 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 SLC22A16Q86VW1 577 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 C9orf40Q8IXQ3 194 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 GOLM1Q8NBJ4 401 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 OR5L2Q8NGL0 311 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 RGMAQ96B86 450 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 FAM173AQ9BQD7 235 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 RPF2Q9H7B2 306 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 ACTR8Q9H981 624 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 DNAJC13O75165 2243 aa20.18■□□□□ 0.82
RPUSD3-206ENST00000433535 OTOGQ6ZRI0 2925 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 FAM90A27PA6NNH2 459 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 NPIPA2E9PIF3 369 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 NPIPA3F8WFD2 350 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 GLSO94925 669 aaPredicted RBP20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 SSTR2P30874 369 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 PIK3CBP42338 1070 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 MAGEA5P43359 124 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 KRTAP10-9P60411 292 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 RPS13P62277 151 aaKnown RBP20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 PLIN5Q00G26 463 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 OPN5Q6U736 354 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 MEX3BQ6ZN04 569 aaKnown RBP20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 FAM47EQ6ZV65 393 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 GPR180Q86V85 440 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 RHEBL1Q8TAI7 183 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 SENP5Q96HI0 755 aaPredicted RBP20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 SPOCK3Q9BQ16 436 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 ZNF717Q9BY31 904 aaPredicted RBP20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 ENKD1Q9H0I2 346 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 SACM1LQ9NTJ5 587 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 TNFRSF10DQ9UBN6 386 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 RNF6Q9Y252 685 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 ATG4BQ9Y4P1 393 aa20.17■□□□□ 0.82
RPUSD3-206ENST00000433535 POLQO75417 2590 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 NKX2-6A6NCS4 301 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 IGKV3-11P04433 115 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 CELA3AP09093 270 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 POU3F2P20265 443 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 CNR1P21554 472 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 FAM83EQ2M2I3 478 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 NDUFAF5Q5TEU4 345 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 TMEM211Q6ICI0 200 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 PAOXQ6QHF9 649 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 RGS9BPQ6ZS82 235 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 ZCCHC7Q8N3Z6 543 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 MMGT1Q8N4V1 131 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 TMEM251Q8N6I4 163 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 ACBD4Q8NC06 268 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 OR5M9Q8NGP3 310 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 SGCZQ96LD1 299 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 SMC6Q96SB8 1091 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 CENPKQ9BS16 269 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 LRRC1Q9BTT6 524 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 SEMA4BQ9NPR2 832 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 PNPLA3Q9NST1 481 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 MS4A12Q9NXJ0 267 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 TUBA8Q9NY65 449 aaPredicted RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 CPSF2Q9P2I0 782 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 ADGRE2Q9UHX3 823 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 PHF11Q9UIL8 331 aa20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 TEP1Q99973 2627 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-206ENST00000433535 A0A096LPK6 155 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 WASHC1A8K0Z3 465 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 TMPRSS11DO60235 418 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 EEDO75530 441 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 P04436 131 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 PIGAP37287 484 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 PIK3CGP48736 1102 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 ALDH18A1P54886 795 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 FOXO1Q12778 655 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 GTF2H2Q13888 395 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 CPSF6Q16630 551 aaKnown RBP eCLIP20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 MPEG1Q2M385 716 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 GTF2H2CQ6P1K8 395 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 GOLGA7Q7Z5G4 137 aa20.15■□□□□ 0.82
RPUSD3-206ENST00000433535 CCDC71Q8IV32 467 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms