RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 KIR2DL3P43628 341 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ATP6V0D1P61421 351 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 PPP2R2AP63151 447 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 DR1Q01658 176 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 IRF8Q02556 426 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ASPHQ12797 758 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 PDIA2Q13087 525 aaKnown RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 HSPB2Q16082 182 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 AP5B1Q2VPB7 878 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ZNF791Q3KP31 576 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 FBXW8Q8N3Y1 598 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 PAQR8Q8TEZ7 354 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ANKRD9Q96BM1 317 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 SPACA9Q96E40 222 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 LRRC46Q96FV0 321 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 SENP5Q96HI0 755 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ZNF703Q9H7S9 590 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 PRM3Q9NNZ6 103 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ZFP64Q9NPA5 681 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 SEMA4BQ9NPR2 832 aaPredicted RBP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRKDC-203ENST00000432581 QPCTLQ9NXS2 382 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 AKAP6Q13023 2319 aa13.73□□□□□ -0.21
PRKDC-203ENST00000432581 NAV3Q8IVL0 2385 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 SYT5O00445 386 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 FGF17O60258 216 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 S100BP04271 92 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 IGKV3-11P04433 115 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 TCP1P17987 556 aaKnown RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CPN2P22792 545 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 SERPINB1P30740 379 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CASP2P42575 452 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 MSH2P43246 934 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 SSR2P43308 183 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 KCNJ2P63252 427 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 IGLV3-21P80748 117 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 ID2Q02363 134 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CHIT1Q13231 466 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 FBXO48Q5FWF7 155 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 LRRC70Q7Z2Q7 622 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 C9orf40Q8IXQ3 194 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 SPATA6LQ8N4H0 392 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 PDPRQ8NCN5 879 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 BBOF1Q8ND07 529 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 ZNF473Q8WTR7 871 aaKnown RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 RMND5BQ96G75 393 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 RBM18Q96H35 190 aaKnown RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 KRT12Q99456 494 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 ACKR4Q9NPB9 350 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 RASSF1Q9NS23 344 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 MS4A12Q9NXJ0 267 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CD274Q9NZQ7 290 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 CNIH4Q9P003 139 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
PRKDC-203ENST00000432581 PTBP2Q9UKA9 531 aaKnown RBP13.72□□□□□ -0.21
PRKDC-203ENST00000432581 E7ESA3 106 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 RTCAO00442 366 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 CD1DP15813 335 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 KLK2P20151 261 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 DNASE1P24855 282 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 E2F2Q14209 437 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 FASTKD3Q14CZ7 662 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 ADGRD1Q6QNK2 874 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 LAS2Q8IYD9 372 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 ULK2Q8IYT8 1036 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 LRRC25Q8N386 305 aaPredicted RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 LIX1Q8N485 282 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 NEIL3Q8TAT5 605 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 CDKL2Q92772 493 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 TANKQ92844 425 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 ESAMQ96AP7 390 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 FBXL20Q96IG2 436 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 CD244Q9BZW8 370 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 RPF2Q9H7B2 306 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 TXNDC16Q9P2K2 825 aa13.71□□□□□ -0.21
PRKDC-203ENST00000432581 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
PRKDC-203ENST00000432581 ABCA2Q9BZC7 2435 aa13.71□□□□□ -0.22
PRKDC-203ENST00000432581 PRRC2AP48634 2157 aaKnown RBP13.71□□□□□ -0.22
PRKDC-203ENST00000432581 ACANP16112 2415 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 LRRC3CA6NJW4 275 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 DVL2O14641 736 aa13.7□□□□□ -0.22
PRKDC-203ENST00000432581 PHGDHO43175 533 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms