RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMEM89A2RUT3 159 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SHISA7A6NL88 538 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 A8MU76 341 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 MPTX1A8MV57 137 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 HHLA1C9JL84 531 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 NR5A2O00482 541 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CHEK1O14757 476 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OGTO15294 1046 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SIGLEC5O15389 551 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SOCS5O75159 536 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 B3GALNT1O75752 331 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 STAM2O75886 525 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR6B1O95007 311 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 HMBSP08397 361 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 PRKAR1AP10644 381 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FERP16591 822 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF18P17022 549 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FUT1P19526 365 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 DNAJB1P25685 340 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 PTPN4P29074 926 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 AKT2P31751 481 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 ALDH3B1P43353 468 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SSTP61278 116 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FUT7Q11130 342 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 PPP1R8Q12972 351 aaKnown RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 LYPLAL1Q5VWZ2 237 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR6B2Q6IFH4 312 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM159AQ6UWV7 190 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OLFM4Q6UX06 510 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 C3P1Q6ZMU1 363 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 WDR88Q6ZMY6 472 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FRRS1Q6ZNA5 592 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RBM43Q6ZSC3 357 aaKnown RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CDHR3Q6ZTQ4 885 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RFPL4BQ6ZWI9 263 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 TAF8Q7Z7C8 310 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SYVN1Q86TM6 617 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RNF148Q8N7C7 305 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR6M1Q8NGM8 313 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR6S1Q8NH40 331 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 GOLGA5Q8TBA6 731 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPR148Q8TDV2 347 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CAPNS2Q96L46 248 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 TSGA13Q96PP4 275 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RAB40CQ96S21 281 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 COQ7Q99807 217 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 UBAC1Q9BSL1 405 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RBM4Q9BWF3 364 aaKnown RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 EGLN1Q9GZT9 426 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 WWP1Q9H0M0 922 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 DDX47Q9H0S4 455 aaKnown RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 WDR13Q9H1Z4 485 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC26A1Q9H2B4 701 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CXXC4Q9H2H0 198 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 S100A14Q9HCY8 104 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 STARD5Q9NSY2 213 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM212BQ9NTI7 297 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 PLCXD1Q9NUJ7 323 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 PLEK2Q9NYT0 353 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM153AQ9UHL3 310 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 ERRFI1Q9UJM3 462 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 GAB2Q9UQC2 676 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 RICTORQ6R327 1708 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 FER1L5A0AVI2 2057 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CLIP1P30622 1438 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 CEP170BQ9Y4F5 1589 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 NLRP1Q9C000 1473 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 IGHV3-38A0A0C4DH36 116 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MEX3AA1L020 520 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 RGSL1A5PLK6 1076 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ARHGAP42A6NI28 874 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 RASGRF2O14827 1237 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 IKBKBO14920 756 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ADAM12O43184 909 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 TXNL1O43396 289 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 TNFSF12O43508 249 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 PTBP3O95758 552 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CLDN1O95832 211 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 APRTP07741 180 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 KRT5P13647 590 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MARCKSP29966 332 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCND2P30279 289 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MAT2AP31153 395 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 STIP1P31948 543 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPR183P32249 361 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ASMTP46597 345 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZFP36L2P47974 494 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC6A8P48029 635 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 KCNK10P57789 538 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CYCSP99999 105 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 GALK2Q01415 458 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 EXOSC7Q15024 291 aaKnown RBP2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 WSCD2Q2TBF2 565 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 MPPE1Q53F39 396 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 ELMOD1Q8N336 334 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCDC197Q8NCU1 140 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM71CQ8NEG0 241 aa2.66□□□□□ -1.98
HMGB1P27-201ENST00000431429 PRSS33Q8NF86 280 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms