RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 C8orf89P0DMQ9 161 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ESRRAP11474 423 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CD1EP15812 388 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPINK2P20155 84 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRDX6P30041 224 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SOAT1P35610 550 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FEN1P39748 380 aaKnown RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CPA2P48052 419 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NCBP2P52298 156 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 HSD17B7P56937 341 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FOXL2P58012 376 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 MXRA7P84157 204 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PLIN5Q00G26 463 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SRSF11Q05519 484 aaKnown RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 STX4Q12846 297 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 HSPB3Q12988 150 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 KRT72Q14CN4 511 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 MAPKAPK3Q16644 382 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF750Q32MQ0 723 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 VWA2Q5GFL6 755 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANXA8L1Q5VT79 327 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM91A1Q658Y4 838 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 LCN10Q6JVE6 187 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM199XQ6PEV8 388 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC2A7Q6PXP3 512 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CAMKMTQ7Z624 323 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SAMD14Q8IZD0 417 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NLGN4XQ8N0W4 816 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 LRRC25Q8N386 305 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 VPS37AQ8NEZ2 397 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NLGN4YQ8NFZ3 816 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZFP28Q8NHY6 868 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 DNAJB14Q8TBM8 379 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 STT3BQ8TCJ2 826 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CT55Q8WUE5 264 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 RCN3Q96D15 328 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 COQ8BQ96D53 544 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CNRIP1Q96F85 164 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZBED6CLQ96FA7 236 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ITCHQ96J02 903 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PTCHD1Q96NR3 888 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC46A1Q96NT5 459 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NPAS2Q99743 824 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CRB3Q9BUF7 120 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 B3GNT4Q9C0J1 378 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 BHLHE41Q9C0J9 482 aaPredicted RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 RMND5AQ9H871 391 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 WDR54Q9H977 334 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRDM9Q9NQV7 894 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 LANCL2Q9NS86 450 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ARL8BQ9NVJ2 186 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM120CQ9NX05 1096 aaKnown RBP7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 TAGLN3Q9UI15 199 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PADI2Q9Y2J8 665 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 NDUFAF1Q9Y375 327 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 MMACHCQ9Y4U1 282 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 PCDHGA7Q9Y5G6 932 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 UNC13CQ8NB66 2214 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 IGLV3-12A0A075B6K2 115 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 MYOCOSA0A1B0GUC4 107 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 A0A1W2PRB8 838 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 A0A1W2PS29 197 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ASPDHA6ND91 283 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR2W5A6NFC9 320 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CDRT15L2A8MXV6 281 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 IDSB3KWA1 339 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 RFXANKO14593 260 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 MRASO14807 208 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 AIM2O14862 343 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TBX19O60806 448 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CTNSO60931 367 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CNOT3O75175 753 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 DXOO77932 396 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CPSF4O95639 269 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 GPR75O95800 540 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 C6orf47O95873 294 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ONECUT2O95948 504 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ALBP02768 609 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 IFNA16P05015 189 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ABCB1P08183 1280 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CPMP14384 443 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CSNK2A2P19784 350 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TCN2P20062 427 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NT5EP21589 574 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CD82P27701 267 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PTGER1P34995 402 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 GPC1P35052 558 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 FOLR3P41439 243 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 STAT5AP42229 794 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ID4P47928 161 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZFP36L2P47974 494 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NUDT2P50583 147 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 XKP51811 444 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 MNAT1P51948 309 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 BTG2P78543 158 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 RHAGQ02094 409 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 STX5Q13190 355 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NFYCQ13952 458 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms