RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PLPP1O14494 284 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 CNR1P21554 472 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 CPN2P22792 545 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 MAGEA5P43359 124 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 NUP107P57740 925 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 PLGLB1Q02325 96 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 ASPHQ12797 758 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 SLAMF1Q13291 335 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 DDX39BQ13838 428 aaKnown RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 SERTAD2Q14140 314 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 OR4C11Q6IEV9 310 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 MEX3BQ6ZN04 569 aaKnown RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 RTL4Q6ZR62 310 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 TEX9Q8N6V9 391 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 SRFBP1Q8NEF9 429 aaKnown RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 C14orf79Q96F83 325 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 CMTM7Q96FZ5 175 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 SENP5Q96HI0 755 aaPredicted RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 MTERF1Q99551 399 aaKnown RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 PHACTR1Q9C0D0 580 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 TP63Q9H3D4 680 aaPredicted RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 NMRAL1Q9HBL8 299 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 SH2D2AQ9NP31 389 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 DMRT3Q9NQL9 472 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 PNPLA3Q9NST1 481 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 TUBA8Q9NY65 449 aaPredicted RBP14.35□□□□□ -0.11
SEC13-210ENST00000428626 NINQ8N4C6 2090 aa14.35□□□□□ -0.11
SEC13-210ENST00000428626 A0A1W2PS29 197 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 ESYT3A0FGR9 886 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 FAM90A27PA6NNH2 459 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 EEDO75530 441 aaKnown RBP14.34□□□□□ -0.11
SEC13-210ENST00000428626 TOXO94900 526 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 IGHG3P01860 377 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 C2P06681 752 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 CRABP2P29373 138 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 SSTR2P30874 369 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 PIGAP37287 484 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 STT3AP46977 705 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 RPS13P62277 151 aaKnown RBP14.34□□□□□ -0.11
SEC13-210ENST00000428626 FOLH1Q04609 750 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 PMPCAQ10713 525 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 GXYLT1Q4G148 440 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 PIGGQ5H8A4 983 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 RTL6Q6ICC9 239 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 CHSY3Q70JA7 882 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
SEC13-210ENST00000428626 OR5M9Q8NGP3 310 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 LILRB4Q8NHJ6 448 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 UBE2E3Q969T4 207 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
SEC13-210ENST00000428626 GPR78Q96P69 363 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 FAM173AQ9BQD7 235 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 RPF2Q9H7B2 306 aaKnown RBP14.34□□□□□ -0.11
SEC13-210ENST00000428626 PROK2Q9HC23 129 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 COQ3Q9NZJ6 369 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 FAM215AQ9Y5M1 114 aa14.34□□□□□ -0.11
SEC13-210ENST00000428626 FREM3P0C091 2139 aa14.33□□□□□ -0.11
SEC13-210ENST00000428626 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 TMPRSS11DO60235 418 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 KLK8O60259 260 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 CLPSP04118 112 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 EPB42P16452 691 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 STX2P32856 288 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 BSGP35613 385 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 SLC7A5Q01650 507 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 TNFRSF17Q02223 184 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 TLE4Q04727 773 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 SETDB1Q15047 1291 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 PFKFB4Q16877 469 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 MPEG1Q2M385 716 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 ZNF791Q3KP31 576 aaPredicted RBP14.33□□□□□ -0.12
SEC13-210ENST00000428626 MROH9Q5TGP6 573 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 MRM1Q6IN84 353 aaKnown RBP14.33□□□□□ -0.12
SEC13-210ENST00000428626 TRILQ7L0X0 811 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 SLC22A16Q86VW1 577 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 EID3Q8N140 333 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 ZCCHC7Q8N3Z6 543 aaKnown RBP14.33□□□□□ -0.12
SEC13-210ENST00000428626 GOLM1Q8NBJ4 401 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 OR5L2Q8NGL0 311 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 RHEBL1Q8TAI7 183 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 NUBPLQ8TB37 319 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 SMC6Q96SB8 1091 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 IL1RL2Q9HB29 575 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 ITGB1BP2Q9UKP3 347 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 ACOT9Q9Y305 439 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 UTP11Q9Y3A2 253 aaKnown RBP14.33□□□□□ -0.12
SEC13-210ENST00000428626 TSC22D4Q9Y3Q8 395 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 ASB4Q9Y574 426 aa14.33□□□□□ -0.12
SEC13-210ENST00000428626 C2CD3Q4AC94 2353 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 MTORP42345 2549 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 MED13LQ71F56 2210 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 A0A1B0GVC2 190 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 A0A1W2PR48 441 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 GLOD5A6NK44 160 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 PROM1O43490 865 aa14.32□□□□□ -0.12
SEC13-210ENST00000428626 SIX3O95343 332 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms