RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 FOXF2Q12947 444 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 ACKR1Q16570 336 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 KCTD19Q17RG1 926 aaPredicted RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 NHSL2Q5HYW2 709 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 DCST1Q5T197 706 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 VASNQ6EMK4 673 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 CASC4Q6P4E1 433 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 SYDE1Q6ZW31 735 aaPredicted RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 LUZP2Q86TE4 346 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 C9orf40Q8IXQ3 194 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 LMNTD2Q8IXW0 634 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.42□□□□□ -0.9
RDH11-202ENST00000428130 KLHDC8AQ8IYD2 350 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 C9orf106Q8NAJ2 232 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 SLC22A8Q8TCC7 542 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 ATL1Q8WXF7 558 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 LINGO1Q96FE5 620 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 JSRP1Q96MG2 331 aaPredicted RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 SECISBP2Q96T21 854 aaKnown RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 NDNQ99608 321 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 GSX2Q9BZM3 304 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 UBQLN3Q9H347 655 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 CALHM2Q9HA72 323 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 UBTD1Q9HAC8 227 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 HOMER3Q9NSC5 361 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 CNIH4Q9P003 139 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 C6orf203Q9P0P8 240 aaPredicted RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 COPS7AQ9UBW8 275 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 FBXO5Q9UKT4 447 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 CNOT11Q9UKZ1 510 aaKnown RBP9.42□□□□□ -0.9
RDH11-202ENST00000428130 DAPP1Q9UN19 280 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 ABCA1O95477 2261 aa9.42□□□□□ -0.9
RDH11-202ENST00000428130 A0A088AWK7 358 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 LRIT2A6NDA9 550 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 DEFB108AA8MXU0 73 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 CTIFO43310 598 aaKnown RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 LDB3O75112 727 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 TRIM3O75382 744 aaPredicted RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 IPO7O95373 1038 aaKnown RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 GUCA1CO95843 209 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 TBX6O95947 436 aaPredicted RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 HPNP05981 417 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 TNNI3P19429 210 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 ZNF10P21506 573 aaPredicted RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 CERS1P27544 350 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 SOX18P35713 384 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 SLCO1A2P46721 670 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 CPA2P48052 419 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 PTH2RP49190 550 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 ADPRMQ3LIE5 342 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 PODNL1Q6PEZ8 512 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 DRICH1Q6PGQ1 229 aaPredicted RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 CAND1Q86VP6 1230 aaKnown RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 THOC6Q86W42 341 aaKnown RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 DND1Q8IYX4 353 aaKnown RBP9.41□□□□□ -0.9
RDH11-202ENST00000428130 SLC15A4Q8N697 577 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 GPATCH11Q8N954 259 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 FAM13CQ8NE31 585 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 WDYHV1Q96HA8 205 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 SERINC2Q96SA4 455 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 DOHHQ9BU89 302 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 UGT2B28Q9BY64 529 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 TAS2R13Q9NYV9 303 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 SLC6A5Q9Y345 797 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 MAD1L1Q9Y6D9 718 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 IKBKGQ9Y6K9 419 aa9.41□□□□□ -0.9
RDH11-202ENST00000428130 USF3Q68DE3 2245 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 MAGEB16A2A368 324 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 PABPN1LA6NDY0 278 aaKnown RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 TRAPPC6AO75865 159 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 ACSL3O95573 720 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 IGKV3-11P04433 115 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 NID1P14543 1247 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 CDK9P50750 372 aaKnown RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 PLA2G16P53816 162 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 TERF1P54274 439 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 MTTPP55157 894 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 CDKN2DP55273 166 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 SERTAD2Q14140 314 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 CAPRIN1Q14444 709 aaKnown RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 EFTUD2Q15029 972 aaKnown RBP eCLIP9.4□□□□□ -0.97e-8■■■■■ 59
RDH11-202ENST00000428130 CCNG2Q16589 344 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 RBM20Q5T481 1227 aaKnown RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 TRIM40Q6P9F5 258 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 RAD9BQ6WBX8 426 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 OR2L5Q8NG80 312 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 GABPB2Q8TAK5 448 aaPredicted RBP9.4□□□□□ -0.9
RDH11-202ENST00000428130 CALML6Q8TD86 181 aa9.4□□□□□ -0.9
RDH11-202ENST00000428130 IGFBPL1Q8WX77 278 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms