RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ERCC2P18074 760 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 HOXC13P31276 330 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 BSGP35613 385 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ARL1P40616 181 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 GRIA1P42261 906 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 LHX1P48742 406 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ACADVLP49748 655 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CSRP3P50461 194 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 BLKP51451 505 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 NUP107P57740 925 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DAOAP59103 153 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CRADDP78560 199 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 EFNB1P98172 346 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 EPS8Q12929 822 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 NME3Q13232 169 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 FASTKQ14296 549 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 LRRC36Q1X8D7 754 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 GLRA4Q5JXX5 417 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PRAMEF19Q5SWL8 479 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 HECTD3Q5T447 861 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 OTUD1Q5VV17 481 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CES4AQ5XG92 561 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ATG9BQ674R7 924 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 REP15Q6BDI9 236 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 RWDD4Q6NW29 188 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DCLRE1AQ6PJP8 1040 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PRSS45Q7RTY3 260 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PIGZQ86VD9 579 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 TICAM1Q8IUC6 712 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 NUP93Q8N1F7 819 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 OR6J1Q8NGC5 347 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 OR4N2Q8NGD1 307 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PNPT1Q8TCS8 783 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 TMEM170AQ8WVE7 144 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 FAR1Q8WVX9 515 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PEX13Q92968 403 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 C18orf25Q96B23 403 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DCPSQ96C86 337 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 TMA16Q96EY4 203 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PERPQ96FX8 193 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 WBP1Q96G27 269 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DUS3LQ96G46 650 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF597Q96LX8 424 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CNBD2Q96M20 576 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 BIRC8Q96P09 236 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 RANBP9Q96S59 729 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ANKRD60Q9BZ19 345 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DPEP3Q9H4B8 488 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 POMKQ9H5K3 350 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 MEAF6Q9HAF1 191 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 POPDC3Q9HBV1 291 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 KRCC1Q9NPI7 259 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 IARS2Q9NSE4 1012 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 HCFC1R1Q9NWW0 138 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 DDIT4Q9NX09 232 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 MPP6Q9NZW5 540 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 RSL24D1Q9UHA3 163 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CDH9Q9ULB4 789 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 SLC8A2Q9UPR5 921 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PIN4Q9Y237 131 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 AP4S1Q9Y587 144 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 SYNJ2BP-COX16A0A087WUM0 186 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 A0A087WXM4 84 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 A0A1B0GVT2 93 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 KCNK1O00180 336 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SDHDO14521 159 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 MRASO14807 208 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 ANGPT2O15123 496 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 LDLRAD4O15165 306 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 UBDO15205 165 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 PFDN6O15212 129 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 RGS14O43566 566 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SPRY3O43610 288 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 CACNG3O60359 315 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SNAP91O60641 907 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 DDNO94850 711 aaPredicted RBP4.79□□□□□ -1.64
LINC00458-202ENST00000427299 CCNDBP1O95273 360 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 NFATC1O95644 943 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 GPIP06744 558 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 PGK2P07205 417 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SLC35E2BP0CK96 405 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 ODC1P11926 461 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 DARSP14868 501 aaKnown RBP4.79□□□□□ -1.64
LINC00458-202ENST00000427299 XRCC1P18887 633 aaPredicted RBP4.79□□□□□ -1.64
LINC00458-202ENST00000427299 CCNCP24863 283 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 NNMTP40261 264 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 PSMB10P40306 273 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SLC1A2P43004 574 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 PCYT1AP49585 367 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 CDK9P50750 372 aaKnown RBP4.79□□□□□ -1.64
LINC00458-202ENST00000427299 ERVFC1-1P60608 527 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 PSME3P61289 254 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 ATP6V0D1P61421 351 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 HPCAP84074 193 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 SULT2A1Q06520 285 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 ZBTB17Q13105 803 aa4.79□□□□□ -1.64
LINC00458-202ENST00000427299 GALNT3Q14435 633 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms