RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SH2D4BQ5SQS7 431 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TMEM205Q6UW68 189 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 COMMD6Q7Z4G1 85 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 PPP1R32Q7Z5V6 425 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 C1orf52Q8N6N3 182 aaKnown RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TMEM52Q8NDY8 209 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 OR2T11Q8NH01 316 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 RAB3IL1Q8TBN0 382 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 UCN3Q969E3 161 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 NACC2Q96BF6 587 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 TBC1D20Q96BZ9 403 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 APIPQ96GX9 242 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 OR1F2PQ96R84 312 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 CENPKQ9BS16 269 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 CRB3Q9BUF7 120 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 VN1R1Q9GZP7 353 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 ILKAPQ9H0C8 392 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 MANSC1Q9H8J5 431 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 COPS7BQ9H9Q2 264 aaPredicted RBP6.97□□□□□ -1.29
LINC01049-201ENST00000426840 LYRM4Q9HD34 91 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 NECTIN3Q9NQS3 549 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SEMA3GQ9NS98 782 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 PNPOQ9NVS9 261 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 THAP1Q9NVV9 213 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 NMRK1Q9NWW6 199 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 SIRT5Q9NXA8 310 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 AHSPQ9NZD4 102 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 C3orf18Q9UK00 162 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 ADAM29Q9UKF5 820 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 PADI2Q9Y2J8 665 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 FIS1Q9Y3D6 152 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 ATG4BQ9Y4P1 393 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 CLDN16Q9Y5I7 305 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 PTGDR2Q9Y5Y4 395 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 HS3ST3B1Q9Y662 390 aa6.97□□□□□ -1.29
LINC01049-201ENST00000426840 LOC102723996A0A087X1L8 192 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 A0A1W2PR48 441 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 WASHC1A8K0Z3 465 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 SOCS6O14544 535 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 PIP5K1BO14986 540 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 PROM1O43490 865 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 B4GALT2O60909 372 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CTNSO60931 367 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 ALOX12BO75342 701 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 SNUPNO95149 360 aaKnown RBP6.96□□□□□ -1.3
LINC01049-201ENST00000426840 HSPA4LO95757 839 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 IGHEP01854 428 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 GBAP04062 536 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 HEXBP07686 556 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 FHP07954 510 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 FAM58BPP0C7Q3 252 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 PRKAR1AP10644 381 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 PRPH2P23942 346 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 OTX2P32243 289 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 RPL14P50914 215 aaKnown RBP6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CXADRP78310 365 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 OCRLQ01968 901 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CDC20Q12834 499 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 XKR7Q5GH72 579 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 ATG16L1Q676U5 607 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 C18orf63Q68DL7 685 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 GALNT18Q6P9A2 607 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 KIRREL2Q6UWL6 708 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 GPR180Q86V85 440 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 NUDT13Q86X67 352 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 SCUBE1Q8IWY4 988 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 ZNF781Q8N8C0 355 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 AGR3Q8TD06 166 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 TWIST2Q8WVJ9 160 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CKAP2Q8WWK9 683 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 THAP4Q8WY91 577 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 TM4SF18Q96CE8 201 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 C3orf30Q96M34 536 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CSF3RQ99062 836 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.3
LINC01049-201ENST00000426840 FBXW2Q9UKT8 454 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 CACNA1BQ00975 2339 aa6.96□□□□□ -1.3
LINC01049-201ENST00000426840 ANKRD11Q6UB99 2663 aaPredicted RBP6.96□□□□□ -1.3
LINC01049-201ENST00000426840 DMXL2Q8TDJ6 3036 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 CELSR3Q9NYQ7 3312 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 FREM2Q5SZK8 3169 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 A0A1W2PQ72 361 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 MASP2O00187 686 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 PSMD12O00232 456 aaPredicted RBP6.95□□□□□ -1.3
LINC01049-201ENST00000426840 LSM1O15116 133 aaKnown RBP6.95□□□□□ -1.3
LINC01049-201ENST00000426840 PGRMC2O15173 223 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 RGS14O43566 566 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 CDC123O75794 336 aaPredicted RBP6.95□□□□□ -1.3
LINC01049-201ENST00000426840 RSL1D1O76021 490 aaKnown RBP6.95□□□□□ -1.3
LINC01049-201ENST00000426840 CHEK2O96017 543 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 JUNP05412 331 aaKnown RBP6.95□□□□□ -1.3
LINC01049-201ENST00000426840 CYC1P08574 325 aa6.95□□□□□ -1.3
LINC01049-201ENST00000426840 NR1D1P20393 614 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms