RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 KCNE2Q9Y6J6 123 aa12.43□□□□□ -0.42
VEGFB-202ENST00000426086 NPEPPSL1A6NEC2 478 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 TRIM64A6NGJ6 449 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 TRIM64BA6NI03 449 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 EEF1E1-BLOC1S5C9J1V9 151 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 EEF1E1O43324 174 aaKnown RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 IL2RAP01589 272 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 IGKV3-11P04433 115 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 ENO2P09104 434 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 CXCR5P32302 372 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 MTTPP55157 894 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 STX4Q12846 297 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 FOXF2Q12947 444 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 CRYMQ14894 314 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 NSUN5P2Q63ZY6 315 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 BICRALQ6AI39 1079 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 PLXDC2Q6UX71 529 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 TMIGD1Q6UXZ0 262 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 UBE3DQ7Z6J8 389 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 PPWD1Q96BP3 646 aaKnown RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 LRRC46Q96FV0 321 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 SENP5Q96HI0 755 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 F2RL3Q96RI0 385 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 YIPF4Q9BSR8 244 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 REXO4Q9GZR2 422 aaKnown RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 QPCTLQ9NXS2 382 aa12.42□□□□□ -0.42
VEGFB-202ENST00000426086 ZNF490Q9ULM2 529 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 MRPS33Q9Y291 106 aaKnown RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 NSD1Q96L73 2696 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 MAP1AP78559 2803 aaPredicted RBP12.42□□□□□ -0.42
VEGFB-202ENST00000426086 PABPN1LA6NDY0 278 aaKnown RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 MBD3L4A6NDZ8 208 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 MBD3L3A6NE82 208 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 MBD3L5A6NJ08 208 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 RTCAO00442 366 aaKnown RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 SIAH2O43255 324 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 FGF17O60258 216 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 CLEC3AO75596 197 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 WDR47O94967 919 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 ACSL3O95573 720 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 C1QAP02745 245 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 GDF1P27539 372 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 SLCO1A2P46721 670 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 SORDQ00796 357 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 FNDC7Q5VTL7 733 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 TRIM40Q6P9F5 258 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 TMEM64Q6YI46 380 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 KIF18BQ86Y91 864 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 IGDCC3Q8IVU1 814 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 LIX1Q8N485 282 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 MBD3L2Q8NHZ7 208 aaPredicted RBP12.41□□□□□ -0.42
VEGFB-202ENST00000426086 NUBPLQ8TB37 319 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 TRIB1Q96RU8 372 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 PRDM14Q9GZV8 571 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
VEGFB-202ENST00000426086 CSPG4Q6UVK1 2322 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 DOCK7Q96N67 2140 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 TRIM3O75382 744 aaPredicted RBP12.4□□□□□ -0.42
VEGFB-202ENST00000426086 FBXO45P0C2W1 286 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 CD22P20273 847 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 CTSSP25774 331 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 SLC6A12P48065 614 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 SERTAD2Q14140 314 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 ZNF460Q14592 562 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.424e-10■■■■■ 32.9
VEGFB-202ENST00000426086 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 VASNQ6EMK4 673 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 P3H2Q8IVL5 708 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 SLC22A8Q8TCC7 542 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 ESAMQ96AP7 390 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 WDYHV1Q96HA8 205 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 PDLIM5Q96HC4 596 aaKnown RBP12.4□□□□□ -0.42
VEGFB-202ENST00000426086 DOHHQ9BU89 302 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 CAMK2AQ9UQM7 478 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 VWA7Q9Y334 891 aa12.4□□□□□ -0.42
VEGFB-202ENST00000426086 CD8B2A6NJW9 211 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 WASHC1A8K0Z3 465 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 H2AFYO75367 372 aaKnown RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 SH3BGRLO75368 114 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 PRKRAO75569 313 aaKnown RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 ZNF37AP17032 561 aaPredicted RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 BMP7P18075 431 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 PGAM1P18669 254 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 GNAZP19086 355 aa12.39□□□□□ -0.43
VEGFB-202ENST00000426086 IGLV3-21P80748 117 aaPredicted RBP12.39□□□□□ -0.43
VEGFB-202ENST00000426086 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms