RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RGMAQ96B86 450 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 VMP1Q96GC9 406 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 MAPKAP1Q9BPZ7 522 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 SORBS1Q9BX66 1292 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 HES7Q9BYE0 225 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 NOL11Q9H8H0 719 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 LRFN1Q9P244 771 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 CLCA3PQ9Y6N3 262 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 SCN2AQ99250 2005 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 MYOCOSA0A1B0GUC4 107 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 H0YIV9 168 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 STX16-NPEPL1H3BU86 382 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 CYR61O00622 381 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 PLPP1O14494 284 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 STX16O14662 325 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 RIPK2O43353 540 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 CTNSO60931 367 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 LDB3O75112 727 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 SCELO95171 688 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 CLDN9O95484 217 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 TNNI3P19429 210 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 CYB561P49447 251 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 IST1P53990 364 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 MLF1P58340 268 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 SRSF11Q05519 484 aaKnown RBP11.84□□□□□ -0.51
SGCE-203ENST00000425444 LTBQ06643 244 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 SLAMF1Q13291 335 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 SERTAD2Q14140 314 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
SGCE-203ENST00000425444 OR4C11Q6IEV9 310 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 APCDD1LQ8NCL9 501 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 DNAJB8Q8NHS0 232 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 DAZLQ92904 295 aaKnown RBP11.84□□□□□ -0.51
SGCE-203ENST00000425444 TMEM125Q96AQ2 219 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 MTBPQ96DY7 904 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 CDK15Q96Q40 435 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 MRPL57Q9BQC6 102 aaKnown RBP11.84□□□□□ -0.51
SGCE-203ENST00000425444 ALOXE3Q9BYJ1 711 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 ENKD1Q9H0I2 346 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 MRPL46Q9H2W6 279 aaKnown RBP11.84□□□□□ -0.51
SGCE-203ENST00000425444 RNF11Q9Y3C5 154 aa11.84□□□□□ -0.51
SGCE-203ENST00000425444 OR7A17O14581 309 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 SLC19A2O60779 497 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 SLC25A12O75746 678 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 NEURL1O76050 574 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 MLYCDO95822 493 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 SP1P08047 785 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 COX7A2P14406 83 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 PTX3P26022 381 aaPredicted RBP11.83□□□□□ -0.52
SGCE-203ENST00000425444 DNAJA1P31689 397 aaKnown RBP11.83□□□□□ -0.52
SGCE-203ENST00000425444 BUD31P41223 144 aaPredicted RBP11.83□□□□□ -0.52
SGCE-203ENST00000425444 ID2Q02363 134 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 SLC25A25Q6KCM7 469 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 CYP20A1Q6UW02 462 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 GALNTL5Q7Z4T8 443 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 GSPT2Q8IYD1 628 aaKnown RBP11.83□□□□□ -0.52
SGCE-203ENST00000425444 TMEM156Q8N614 296 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 L3MBTL4Q8NA19 623 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 OR52B6Q8NGF0 335 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 SREK1Q8WXA9 508 aaKnown RBP11.83□□□□□ -0.52
SGCE-203ENST00000425444 SCMH1Q96GD3 660 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 MS4A12Q9NXJ0 267 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 KCMF1Q9P0J7 381 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 PHF11Q9UIL8 331 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 TINAGQ9UJW2 476 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 PCTPQ9UKL6 214 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 CLDN16Q9Y5I7 305 aa11.83□□□□□ -0.52
SGCE-203ENST00000425444 IQANK1A0A1B0GTG1 560 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 C17orf105B2RV13 164 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 CDK2AP1O14519 115 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 DYRK3O43781 588 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ITGA10O75578 1167 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ZFAND5O76080 213 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 FAM153BP0C7A2 387 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 TAC1P20366 129 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 MST1P26927 711 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 TLX1P31314 330 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 HLCSP50747 726 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 NEK2P51955 445 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 TNFRSF17Q02223 184 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ALDH6A1Q02252 535 aaKnown RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 GTF3C1Q12789 2109 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 FOXD4Q12950 439 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 C3AR1Q16581 482 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 FAM153CQ494X1 144 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ZNF468Q5VIY5 522 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 GPR180Q86V85 440 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 NUDT13Q86X67 352 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 OR4N5Q8IXE1 308 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 CYP4Z2PQ8N1L4 340 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ZCCHC7Q8N3Z6 543 aaKnown RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 NRGNQ92686 78 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 DGAT2Q96PD7 388 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms