RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 GPR171O14626 319 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 INSIG1O15503 277 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TLX2O43763 284 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 AHSA1O95433 338 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 S1PR4O95977 384 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 F10P00742 488 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ACADSP16219 412 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TFE3P19532 575 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LMO1P25800 156 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 HOXA6P31267 233 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TTKP33981 857 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GABRB2P47870 512 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CACNG1Q06432 222 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM115Q12893 351 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RTP5Q14D33 572 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SLC5A12Q1EHB4 618 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GPAT3Q53EU6 434 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 MS4A13Q5J8X5 152 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CEP78Q5JTW2 689 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PCID2Q5JVF3 399 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 Q5PR19 223 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RNASEH2BQ5TBB1 312 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 IL23RQ5VWK5 629 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CERS6Q6ZMG9 384 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RIPOR1Q6ZS17 1223 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 S100A7AQ86SG5 101 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ASPGQ86U10 573 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC6Q86X45 466 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C2orf73Q8N5S3 287 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LINC01465Q8N7H1 131 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SLC43A3Q8NBI5 491 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ST6GALNAC3Q8NDV1 305 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZSWIM2Q8NEG5 633 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ACVR1CQ8NER5 493 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 OR5M9Q8NGP3 310 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LMO3Q8TAP4 145 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ELMO3Q96BJ8 720 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB9Q96C00 473 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 EID2BQ96D98 161 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C1orf74Q96LT6 269 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LMF1Q96S06 567 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 KCNK9Q9NPC2 374 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C1GALT1Q9NS00 363 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GDAP2Q9NXN4 497 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SH3BP4Q9P0V3 963 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CDH22Q9UJ99 828 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CHKBQ9Y259 395 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 PCDHGA3Q9Y5H0 932 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ACTL7BQ9Y614 415 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 F5P12259 2224 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZSCAN5BA6NJL1 495 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 H7C1Q1 480 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TM9SF1O15321 606 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NDUFS4O43181 175 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 UGT1A9O60656 530 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TPPPO94811 219 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CLPTM1O96005 669 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 C1QAP02745 245 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SCG5P05408 212 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 HOXB1P14653 301 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ATP5F1P24539 256 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 RPL10P27635 214 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SERPINB4P48594 390 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SERPINH1P50454 418 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 COPS2P61201 443 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 FOXL1Q12952 345 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ARHGAP19Q14CB8 494 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NKG7Q16617 165 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 CCDC153Q494R4 210 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 XKR6Q5GH73 641 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 BEND6Q5SZJ8 279 aaPredicted RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TYW3Q6IPR3 259 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NR2C2APQ86WQ0 139 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 MCATQ8IVS2 390 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 KIF2BQ8N4N8 673 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF599Q96NL3 588 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 MCEEQ96PE7 176 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 HDAC8Q9BY41 377 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 UGT1A7Q9HAW7 530 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 UGT1A10Q9HAW8 530 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 UGT1A8Q9HAW9 530 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 NMUR1Q9HB89 426 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 MMP25Q9NPA2 562 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GPRC5BQ9NZH0 403 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 GMPPBQ9Y5P6 360 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 TLN1Q9Y490 2541 aaKnown RBP3.37□□□□□ -1.87
TOP2A-201ENST00000423485 LRRK1Q38SD2 2015 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 SPTA1P02549 2419 aa3.37□□□□□ -1.87
TOP2A-201ENST00000423485 DNAJC25-GNG10A0A024R161 153 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC22A20A6NK97 555 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 MSI1O43347 362 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LMX1BO60663 402 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SOX30O94993 753 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OPN1MWP04001 364 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OPN1MW2P0DN77 364 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OPN1MW3P0DN78 364 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SRCP12931 536 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF35P13682 527 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms