RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 COQ3Q9NZJ6 369 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CACNA1EQ15878 2313 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 FAM171A2A8MVW0 826 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CAPNS1P04632 268 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 SSTR4P31391 388 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 TIA1P31483 386 aaKnown RBP eCLIP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 OR3A3P47888 321 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 OR3A2P47893 321 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CLCA4Q14CN2 919 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 SPHARQ15513 63 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 DEFB110Q30KQ9 67 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 MARCH8Q5T0T0 291 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 MTFR2Q6P444 385 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 ARHGAP12Q8IWW6 846 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 C9orf43Q8TAL5 461 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CEP76Q8TAP6 659 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 TSPEARQ8WU66 669 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 PRICKLE1Q96MT3 831 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 RC3H2Q9HBD1 1191 aaKnown RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 PFDN2Q9UHV9 154 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 HCN2Q9UL51 889 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 WRBO00258 174 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 SOX1O00570 391 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 ZNF30P17039 623 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CCKBRP32239 447 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CNR2P34972 360 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 GJA5P36382 358 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 DCTP40126 519 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 FXYD6P3P58550 94 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 MVKQ03426 396 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 RING1Q06587 406 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 ZNF791Q3KP31 576 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 PRRT3Q5FWE3 981 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 GTF2IRD2BQ6EKJ0 949 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CRTC1Q6UUV9 634 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 PAQR9Q6ZVX9 377 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CYS1Q717R9 158 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 GTF2IRD2Q86UP8 949 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 GJD3Q8N144 294 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 KLHDC9Q8NEP7 349 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 LRRC20Q8TCA0 184 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CD200R1Q8TD46 325 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 RTP4Q96DX8 246 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 CRELD1Q96HD1 420 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 FAM210AQ96ND0 272 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 NDC1Q9BTX1 674 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 BTBD1Q9H0C5 482 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 SDR39U1Q9NRG7 319 aaPredicted RBP10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 IL17CQ9P0M4 197 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 FNIP2Q9P278 1114 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 EXTL2Q9UBQ6 330 aa10.16□□□□□ -0.78
SEMA4D-208ENST00000422704 A0A096LPI6 279 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CAPN14A8MX76 684 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ANHXE9PGG2 379 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CD72P21854 359 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 RPS3P23396 243 aaKnown RBP eCLIP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 C21orf33P30042 268 aaPredicted RBP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 GABRA3P34903 492 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 TGFBR2P37173 567 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 GCGRP47871 477 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 HLCSP50747 726 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MAP4K2Q12851 820 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 PTGES3Q15185 160 aaKnown RBP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 KLHL26Q53HC5 615 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ZNF805Q5CZA5 627 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 RFLNAQ6ZTI6 216 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 PHC2Q8IXK0 858 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CELF5Q8N6W0 485 aaKnown RBP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 GPR26Q8NDV2 337 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 GATA6Q92908 595 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MYRFLQ96LU7 910 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 FRMD6Q96NE9 622 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 SLC6A15Q9H2J7 730 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 NEUROD4Q9HD90 331 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MBD2Q9UBB5 411 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ZNF69Q9UC07 566 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MAU2Q9Y6X3 613 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CACNA1DQ01668 2161 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 M0R3H8 397 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 GNRH1P01148 92 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 FAM163BP0C2L3 166 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ZNF3P17036 446 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 SMU1Q2TAY7 513 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 TCEAL5Q5H9L2 206 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CLLU1OSQ5K130 101 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 NUP54Q7Z3B4 507 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 COMMD6Q7Z4G1 85 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 KLBQ86Z14 1044 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ASB12Q8WXK4 309 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MCCC1Q96RQ3 725 aaPredicted RBP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 SLC30A3Q99726 388 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MAPKAP1Q9BPZ7 522 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 CHMP1AQ9HD42 196 aaPredicted RBP10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 MKS1Q9NXB0 559 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 ADAMTS5Q9UNA0 930 aa10.15□□□□□ -0.78
SEMA4D-208ENST00000422704 Q9Y3F1 56 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms