RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 SPNS3Q6ZMD2 512 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 FAM83HQ6ZRV2 1179 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 OOSP2Q86WS3 158 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 RAB43Q86YS6 212 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 ULK2Q8IYT8 1036 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 GALNT16Q8N428 558 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 NEK11Q8NG66 645 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 OR1L3Q8NH93 324 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 BRSK1Q8TDC3 778 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 PPP4R1Q8TF05 950 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 TM9SF4Q92544 642 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 KCNJ9Q92806 393 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 FAF2Q96CS3 445 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 HDAC11Q96DB2 347 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 LURAP1Q96LR2 239 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 FER1L6-AS2Q96M78 137 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 GPR78Q96P69 363 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SLX1AQ9BQ83 275 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 WDR77Q9BQA1 342 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SPATA16Q9BXB7 569 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 NPLQ9BXD5 320 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 ADGRE3Q9BY15 652 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 PITPNM3Q9BZ71 974 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 CHRNA10Q9GZZ6 450 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 ILKAPQ9H0C8 392 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 ISCUQ9H1K1 167 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 CLSTN2Q9H4D0 955 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 KIR3DX1Q9H7L2 352 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 ZBTB20Q9HC78 741 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 AGPAT4Q9NRZ5 378 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SEPT11Q9NVA2 429 aaKnown RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 HAUS2Q9NVX0 235 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 HRASLS2Q9NWW9 162 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 LIMA1Q9UHB6 759 aaKnown RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SIRT4Q9Y6E7 314 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-202ENST00000422687 SPTBP11277 2137 aa4.4□□□□□ -1.7
CDC42EP3-202ENST00000422687 A0A1B0GUH1 482 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 OR6C74A6NCV1 312 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 SLC9B1P1A6NJY1 282 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MCIDASD6RGH6 385 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PRSS44E7EML9 344 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GTPBP1O00178 669 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 QSOX1O00391 747 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GAPDHSO14556 408 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 DSCR3O14972 297 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PLOD3O60568 738 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CNOT3O75175 753 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 POP7O75817 140 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 LCA5LO95447 670 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 UMODP07911 640 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CHRM4P08173 479 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ADH4P08319 380 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CD63P08962 238 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HBQ1P09105 142 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CD48P09326 243 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CCDC172P0C7W6 258 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HKR1P10072 659 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MYBL1P10243 752 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 COX7A2P14406 83 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HOXB9P17482 250 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 NDUFB7P17568 137 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 DRD4P21917 467 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 HMGCLP35914 325 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ARL3P36405 182 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CD86P42081 329 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GABRA4P48169 554 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CTSCP53634 463 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 IFI35P80217 286 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 OTUD4Q01804 1114 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 GBE1Q04446 702 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 SLC10A2Q12908 348 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 DCTN2Q13561 401 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 RAPSNQ13702 412 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 DPYSL3Q14195 570 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PIGHQ14442 188 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 BECN1Q14457 450 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MFSD13AQ14CX5 517 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 LARS2Q15031 903 aaKnown RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ATP13A5Q4VNC0 1218 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 FNDC7Q5VTL7 733 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ALS2CLQ60I27 953 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 RHBDD2Q6NTF9 364 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 Q6YL49 198 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZNF571Q7Z3V5 609 aaPredicted RBP4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 MDGA2Q7Z553 956 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 AMZ2Q86W34 360 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 TRAPPC5Q8IUR0 188 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 Q8N1X5 172 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 ZADH2Q8N4Q0 377 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PQLC3Q8N755 202 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 PLD5Q8N7P1 536 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 RASGEF1AQ8N9B8 481 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 CLEC1AQ8NC01 280 aa4.4□□□□□ -1.71
CDC42EP3-202ENST00000422687 DDHD1Q8NEL9 900 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms