RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PSD4Q8NDX1 1056 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 OR52B6Q8NGF0 335 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 DCAKDQ8WVC6 231 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 SREK1Q8WXA9 508 aaKnown RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 DAZLQ92904 295 aaKnown RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 TMEM125Q96AQ2 219 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 MAGED4Q96JG8 741 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 NSUN5Q96P11 429 aaKnown RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 DMRTA2Q96SC8 542 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 PAFAH2Q99487 392 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 CCDC77Q9BR77 488 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 OR8D2Q9GZM6 311 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 IPPKQ9H8X2 491 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 CPSF2Q9P2I0 782 aaKnown RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 SUCOQ9UBS9 1254 aaKnown RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 ADGRE2Q9UHX3 823 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 MEMO1Q9Y316 297 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 ASB4Q9Y574 426 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 HRH3Q9Y5N1 445 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 KLF2Q9Y5W3 355 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-206ENST00000420121 CLCA3PQ9Y6N3 262 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 HCFC1P51610 2035 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 NINQ8N4C6 2090 aa10.24□□□□□ -0.77
SSBP3-206ENST00000420121 CSMD2Q7Z408 3487 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 OTOGQ6ZRI0 2925 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 A0A1B0GTL3 188 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 WWP2O00308 870 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PROM1O43490 865 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 HS6ST1O60243 411 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 MLYCDO95822 493 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 GCAP28676 217 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 STT3AP46977 705 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PIK3CGP48736 1102 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 NEK2P51955 445 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 FOLH1Q04609 750 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 SLAMF1Q13291 335 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 CUL3Q13618 768 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 CPSF6Q16630 551 aaKnown RBP eCLIP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 METTL2BQ6P1Q9 378 aaKnown RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 MTFR2Q6P444 385 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 LYPD8Q6UX82 237 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 RPTNQ6XPR3 784 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 HSDL2Q6YN16 418 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 GPR180Q86V85 440 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 MYLK4Q86YV6 388 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 C9orf40Q8IXQ3 194 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 GPALPP1Q8IXQ4 340 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PTGR2Q8N8N7 351 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 OR52N2Q8NGI0 321 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 UCN3Q969E3 161 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 RGMAQ96B86 450 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 FMO2Q99518 471 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 VPS11Q9H270 941 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 RPF2Q9H7B2 306 aaKnown RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 DDX31Q9H8H2 851 aaKnown RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 ACTR8Q9H981 624 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PSD3Q9NYI0 1048 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 XPR1Q9UBH6 696 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 MTRF1LQ9UGC7 380 aaKnown RBP10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PCTPQ9UKL6 214 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PPT2Q9UMR5 302 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 PCDHGA11Q9Y5H2 935 aa10.23□□□□□ -0.77
SSBP3-206ENST00000420121 A0A1W2PR48 441 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 A0A1W2PS29 197 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ARHGAP10A1A4S6 786 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 A8MVJ9 347 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 KLRC4-KLRK1H3BQV0 150 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 STX16-NPEPL1H3BU86 382 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 FOXE1O00358 373 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 STX16O14662 325 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 HNRNPRO43390 633 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 NADKO95544 446 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 CLPSP04118 112 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 TUBB4AP04350 444 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 AGAP20933 346 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 PTX3P26022 381 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF630Q2M218 657 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF750Q32MQ0 723 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 EMC4Q5J8M3 183 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 KLC3Q6P597 504 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 IL20RBQ6UXL0 311 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 C3P1Q6ZMU1 363 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 RPS27LQ71UM5 84 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 OR2M7Q8NG81 312 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 UHMK1Q8TAS1 419 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 DOK4Q8TEW6 326 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 AGAP11Q8TF27 550 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ASB15Q8WXK1 588 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 IFT81Q8WYA0 676 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 PPWD1Q96BP3 646 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 PHF21BQ96EK2 531 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 SENP5Q96HI0 755 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 SCYL1Q96KG9 808 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 NTMT1Q9BV86 223 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 NOL11Q9H8H0 719 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 TIMMDC1Q9NPL8 285 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 HPF1Q9NWY4 346 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms