RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 C1orf146Q5VVC0 180 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 YOD1Q5VVQ6 348 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 MED25Q71SY5 747 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 B3GNT8Q7Z7M8 397 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 PTRH1Q86Y79 214 aaKnown RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 TTC29Q8NA56 475 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 ALG2Q9H553 416 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 CXorf36Q9H7Y0 433 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 TPT1P8Q9HAU6 139 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 GPATCH2Q9NW75 528 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 PSME2Q9UL46 239 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 VPS4AQ9UN37 437 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 FAM227AF5H4B4 570 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 CIB2O75838 187 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 BCAS2O75934 225 aaPredicted RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 TCN1P20061 433 aaPredicted RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 HTR1EP28566 365 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 MVDP53602 400 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 MANFP55145 182 aaKnown RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 SIM1P81133 766 aaPredicted RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 SHC2P98077 582 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 TRAP1Q12931 704 aaKnown RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 CCNIQ14094 377 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 SPIDRQ14159 915 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF750Q32MQ0 723 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 GPR135Q8IZ08 494 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 THUMPD3Q9BV44 507 aaKnown RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 PCDHAC1Q9H158 963 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 SYNDIG1Q9H7V2 258 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 PCDHGB4Q9UN71 923 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 USP22Q9UPT9 525 aa12.99□□□□□ -0.33
CHMP5-202ENST00000419016 EP300Q09472 2414 aaPredicted RBP12.99□□□□□ -0.33
CHMP5-202ENST00000419016 ERAL1O75616 437 aaKnown RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ABCB1P08183 1280 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 C16orf72Q14CZ0 275 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 CLEC4FQ8N1N0 589 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 BMPERQ8N8U9 685 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 OR10A6Q8NH74 314 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 TANKQ92844 425 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 CDC6Q99741 560 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 CHST8Q9H2A9 424 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 FANCEQ9HB96 536 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 NEUROD4Q9HD90 331 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 IRAK4Q9NWZ3 460 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 NCDNQ9UBB6 729 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 SPACA6W5XKT8 324 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 B4GALT2O60909 372 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 CSNK2A2P19784 350 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 UQCRC2P22695 453 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 PPIBP23284 216 aaKnown RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 AVPR1BP47901 424 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 CDK9P50750 372 aaKnown RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ARSFP54793 590 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 OR4D2P58180 307 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 BNIP2Q12982 314 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ILKQ13418 452 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 TTLL10Q6ZVT0 673 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 PIP4P1Q86T03 277 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 SAMD14Q8IZD0 417 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 TRIML2Q8N7C3 387 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 OR4K14Q8NGD5 310 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 DPH2Q9BQC3 489 aaPredicted RBP12.98□□□□□ -0.33
CHMP5-202ENST00000419016 HCN3Q9P1Z3 774 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF780BQ9Y6R6 833 aa12.98□□□□□ -0.33
CHMP5-202ENST00000419016 DSCR3O14972 297 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
CHMP5-202ENST00000419016 FGF17O60258 216 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 GDF9O60383 454 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 GPR75O95800 540 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 C8orf89P0DMQ9 161 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 NTSP30990 170 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 MPIP34949 423 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 SOX18P35713 384 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 FEN1P39748 380 aaKnown RBP12.97□□□□□ -0.33
CHMP5-202ENST00000419016 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHMP5-202ENST00000419016 MAT1AQ00266 395 aaKnown RBP12.97□□□□□ -0.33
CHMP5-202ENST00000419016 ABHD18Q0P651 414 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 ADRM1Q16186 407 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 CPZQ66K79 652 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 CCDC116Q8IYX3 515 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 ADAMTS18Q8TE60 1221 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 BBS4Q96RK4 519 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 KCTD14Q9BQ13 255 aaPredicted RBP12.97□□□□□ -0.33
CHMP5-202ENST00000419016 SLC35A5Q9BS91 424 aa12.97□□□□□ -0.33
CHMP5-202ENST00000419016 NDC1Q9BTX1 674 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms