RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 DOK4Q8TEW6 326 aa16.19■□□□□ 0.18
SYNGAP1-202ENST00000418600 CHTF18Q8WVB6 975 aa16.19■□□□□ 0.18
SYNGAP1-202ENST00000418600 MRGPRX1Q96LB2 322 aa16.19■□□□□ 0.18
SYNGAP1-202ENST00000418600 RSL24D1Q9UHA3 163 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-202ENST00000418600 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
SYNGAP1-202ENST00000418600 GSTM2P28161 218 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 RPS6KA3P51812 740 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 TSC22D1Q15714 1073 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 PNLDC1Q8NA58 520 aaKnown RBP16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 GPR26Q8NDV2 337 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 NFKBIDQ8NI38 313 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 BRD7Q9NPI1 651 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 GPR160Q9UJ42 338 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 TESMINQ9Y4I5 508 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 DHRS12A0PJE2 317 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 AREL1O15033 823 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 AK1P00568 194 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 TNFSF4P23510 183 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 AVPR2P30518 371 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 RIPK1Q13546 671 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 LCTLQ6UWM7 567 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 STX12Q86Y82 276 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 EMC3Q9P0I2 261 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 TRIM64A6NGJ6 449 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 EFCAB9A8MZ26 197 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 HEXAP06865 529 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 C1SP09871 688 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 UGT2B7P16662 529 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 GCH1P30793 250 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 BMP8BP34820 402 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 ALDH3A2P51648 485 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 TARDBPQ13148 414 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■□ 23.6
SYNGAP1-202ENST00000418600 BMP8AQ7Z5Y6 402 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 CEP97Q8IW35 865 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 OR5P2Q8WZ92 322 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 CCDC86Q9H6F5 360 aaKnown RBP16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 SSC5DA1L4H1 1573 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 ISPDA4D126 451 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 SRPX2O60687 465 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 MAGP20916 626 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 DENND5AQ6IQ26 1287 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 SNX11Q9Y5W9 270 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 OR1D4P47884 311 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 GANABQ14697 944 aaKnown RBP16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 NPWQ8N729 165 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 GALNT6Q8NCL4 622 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 PLGRKTQ9HBL7 147 aa16.18■□□□□ 0.18
SYNGAP1-202ENST00000418600 C11orf98E9PRG8 122 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 DNAJA1P31689 397 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 LIPEQ05469 1076 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 TAZQ16635 292 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 ANKRD26P1Q6NSI1 321 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 FGF21Q9NSA1 209 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 UBR3Q6ZT12 1888 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 TRGV8A0A0C4DH27 118 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 CXCR6O00574 342 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 RETP07949 1114 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 PTGIRP43119 386 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 RPL19P84098 196 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 ZIK1Q3SY52 487 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 METTL21CQ5VZV1 264 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 C6orf120Q7Z4R8 191 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 FAM86B1Q8N7N1 296 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 ZNF781Q8N8C0 355 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 FIZ1Q96SL8 496 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 PCED1AQ9H1Q7 454 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 MCUBQ9NWR8 336 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 A0A1W2PPC4 97 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 MPZL2O60487 215 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 HK1P19367 917 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 SGSHP51688 502 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 AGAP7PQ5VUJ5 663 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 TMEM53Q6P2H8 277 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 ZNF585AQ6P3V2 769 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 IL20RBQ6UXL0 311 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 AGAP4Q96P64 663 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 TAAR9Q96RI9 348 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 FAM120CQ9NX05 1096 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 A6NLC8 198 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 MT-CO3P00414 261 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 B3GNT6Q6ZMB0 384 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 WDR53Q7Z5U6 358 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 NAXDQ8IW45 347 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 TESCQ96BS2 214 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 NECAB3Q96P71 396 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 GATA5Q9BWX5 397 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 C11orf16Q9NQ32 467 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 LHX3Q9UBR4 397 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 EMC9Q9Y3B6 208 aa16.17■□□□□ 0.18
SYNGAP1-202ENST00000418600 SRRM3A6NNA2 597 aaPredicted RBP16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 CERS1P27544 350 aa16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 BBS10Q8TAM1 723 aa16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 LRRC15Q8TF66 581 aa16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 EPHX3Q9H6B9 360 aa16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 PNPLA3Q9NST1 481 aa16.16■□□□□ 0.18
SYNGAP1-202ENST00000418600 SPHK1Q9NYA1 384 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms