RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 KRT81Q14533 505 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 COG2Q14746 738 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PDK3Q15120 406 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SNRNP35Q16560 246 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 MAPK6Q16659 721 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 HADHQ16836 314 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 CEP55Q53EZ4 464 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZC2HC1CQ53FD0 456 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 TFDP3Q5H9I0 405 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CCNYL2Q5T2Q4 361 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 OGFRL1Q5TC84 451 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 GARNL3Q5VVW2 1013 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 METTL21CQ5VZV1 264 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ARMC3Q5W041 872 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 RFWD3Q6PCD5 774 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 C19orf48Q6RUI8 117 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 C16orf54Q6UWD8 224 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 C3orf62Q6ZUJ4 267 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 DENND5BQ6ZUT9 1274 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TMEM179Q6ZVK1 233 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CYS1Q717R9 158 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC26A9Q7LBE3 791 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZNF554Q86TJ5 538 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SETD3Q86TU7 594 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 PRPF39Q86UA1 669 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 CUZD1Q86UP6 607 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC47A2Q86VL8 602 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC26A11Q86WA9 606 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GPALPP1Q8IXQ4 340 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 THNSL1Q8IYQ7 743 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 NUP93Q8N1F7 819 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GPD1LQ8N335 351 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 NAT8LQ8N9F0 302 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 AVL9Q8NBF6 648 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PAPD5Q8NDF8 572 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 DTX3LQ8TDB6 740 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ACMSDQ8TDX5 336 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TAS1R2Q8TE23 839 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 DCAKDQ8WVC6 231 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 DAZLQ92904 295 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 PTERQ96BW5 349 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TMCO6Q96DC7 493 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CMTM5Q96DZ9 223 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ALG14Q96F25 216 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZNF354BQ96LW1 612 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PRICKLE1Q96MT3 831 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 C17orf77Q96MU5 243 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 BIRC8Q96P09 236 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GCNAQ96QF7 691 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PANX3Q96QZ0 392 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ABHD1Q96SE0 405 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TSPAN18Q96SJ8 248 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 LXNQ9BS40 222 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CCDC106Q9BWC9 280 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 APOL6Q9BWW8 343 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 KRTAP17-1Q9BYP8 105 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GCOM2Q9BZD3 368 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 NMUR2Q9GZQ4 415 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 COA1Q9GZY4 146 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 DEFB129Q9H1M3 183 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 TFB2MQ9H5Q4 396 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZNF696Q9H7X3 374 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 KCNK13Q9HB14 408 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 APOBEC3GQ9HC16 384 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 S100A14Q9HCY8 104 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 CD209Q9NNX6 404 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MRPL40Q9NQ50 206 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC35C2Q9NQQ7 365 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ANKEF1Q9NU02 776 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC38A7Q9NVC3 462 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 DNAJC17Q9NVM6 304 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 NPAP1Q9NZP6 1156 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 RHCGQ9UBD6 479 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SLC7A8Q9UHI5 535 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 GRID1Q9ULK0 1009 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 PAIP2BQ9ULR5 123 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 PRPF19Q9UMS4 504 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 PLA2G4CQ9UP65 541 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 WDR37Q9Y2I8 494 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 MRPL11Q9Y3B7 192 aaKnown RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 SPIN1Q9Y657 262 aaPredicted RBP2.47□□□□□ -2.01
VPS41-206ENST00000418457 MAD1L1Q9Y6D9 718 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SSC5DA1L4H1 1573 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 SIP14410 1827 aa2.47□□□□□ -2.01
VPS41-206ENST00000418457 ZNF541Q9H0D2 1346 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 LY75O60449 1722 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 C15orf38-AP3S2A0A0A6YYH1 394 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 hCG_1809904A0A1W2PP81 198 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 A0A1W2PPE2 198 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 A0A1W2PPM1 405 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 A0A1W2PR64 198 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SYNDIG1LA6NDD5 238 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ARHGAP42A6NI28 874 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SDR42E2A6NKP2 422 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 APOC4-APOC2K7ER74 178 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 MCF2LO15068 1137 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SYNCRIPO60506 623 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 RNASEH1O60930 286 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 GLRA3O75311 464 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SNNO75324 88 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms