RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 NME6O75414 186 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CYP17A1P05093 508 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SSR2P43308 183 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCBP3P57721 371 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZNF765Q7L2R6 523 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SMPDL3AQ92484 453 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NEURL3Q96EH8 262 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CDADC1Q9BWV3 514 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZDHHC5Q9C0B5 715 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MIR1-1HGQ9H1L0 117 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RERGLQ9H628 205 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 INSL6Q9Y581 213 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZNF106Q9H2Y7 1883 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 A0A0G2JN53 185 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PLPP1O14494 284 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SEMA3DO95025 777 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCDH8O95206 1070 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DNTTP04053 509 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HSD17B2P37059 387 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PRKCDQ05655 676 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PDZD3Q86UT5 571 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 POF1BQ8WVV4 589 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PIK3R3Q92569 461 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RGMAQ96B86 450 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SPATA5L1Q9BVQ7 753 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 POLR2J2Q9GZM3 115 aaKnown RBP11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 P2RX2Q9UBL9 471 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZAR1LA6NP61 321 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAAHO00519 579 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TPST2O60704 377 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ENTPD6O75354 484 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PTTG1O95997 202 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCCBP05166 539 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 IFNA8P32881 189 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 EPHA5P54756 1037 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 EEF1A2Q05639 463 aaKnown RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LRRTM4Q86VH4 590 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ARRDC3Q96B67 414 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CDCA4Q9BXL8 241 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZCCHC3Q9NUD5 404 aaKnown RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TVP23BQ9NYZ1 205 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SCHIP1Q9P0W5 487 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ANKMY1Q9P2S6 941 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ICKQ9UPZ9 632 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PRAMEF25A6NGN4 478 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ANHXE9PGG2 379 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MOSPD3O75425 235 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OXSR1O95747 527 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TIMP1P01033 207 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CKMT1AP12532 417 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NTSP30990 170 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TCEAL5Q5H9L2 206 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAM46CQ5VWP2 391 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ERN2Q76MJ5 926 aaKnown RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KIAA0907Q7Z7F0 614 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 OR8J1Q8NGP2 316 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAIM2Q9BWQ8 316 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FKBP14Q9NWM8 211 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MOSPD1Q9UJG1 213 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SSR3Q9UNL2 185 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 PCDHGB6Q9Y5F9 930 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DOCK6Q96HP0 2047 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FGBP02675 491 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 KRT8P05787 483 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CSTF2P33240 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TIE1P35590 1138 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 DAB2P98082 770 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 RPA4Q13156 261 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SPHARQ15513 63 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZNF547Q8IVP9 402 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CYP4Z2PQ8N1L4 340 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMIEQ8NEW7 156 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC35G5Q96KT7 338 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 LINC00615Q96LM1 132 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 SLC30A2Q9BRI3 323 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 TMEM165Q9HC07 324 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 NFATC1O95644 943 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 CEBPBP17676 345 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MYL12AP19105 171 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 GRK5P34947 590 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ARMC4Q5T2S8 1044 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 FAM83HQ6ZRV2 1179 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ZNF354BQ96LW1 612 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 MND1Q9BWT6 205 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 ASPNQ9BXN1 380 aa11.11□□□□□ -0.63
CSPG4P3Y-201ENST00000418188 A4GALTQ9NPC4 353 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms