RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 SFTPA2Q8IWL1 248 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 DHRSXQ8N5I4 330 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 OR2T29Q8NH02 315 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 MAGEE2Q8TD90 523 aaPredicted RBP15.88■□□□□ 0.13
SSBP3-205ENST00000417664 NRBF2Q96F24 287 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 MAPKAP1Q9BPZ7 522 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 CAAP1Q9H8G2 361 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 UBAP1Q9NZ09 502 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 DLGAP2Q9P1A6 1054 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 SLC22A7Q9Y694 548 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF780BQ9Y6R6 833 aa15.88■□□□□ 0.13
SSBP3-205ENST00000417664 TMEM247A6NEH6 219 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 PGRMC2O15173 223 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 P2RX6O15547 441 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 E2F6O75461 281 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 GCM2O75603 506 aaPredicted RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 ERAL1O75616 437 aaKnown RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 CDK9P50750 372 aaKnown RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 C21orf59P57076 290 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 ZC3H12BQ5HYM0 836 aaKnown RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 FAM180BQ6P0A1 224 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 ST13P4Q8IZP2 240 aaPredicted RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 NFKBIDQ8NI38 313 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 ERVMER34-1Q9H9K5 563 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 KCMF1Q9P0J7 381 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 SPACA6W5XKT8 324 aa15.87■□□□□ 0.13
SSBP3-205ENST00000417664 TDRD6O60522 2096 aaKnown RBP15.87■□□□□ 0.13
SSBP3-205ENST00000417664 LOC105369274A0A096LPK9 316 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 LOC102723532A0A0G2JNH3 316 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 A6NHS1 94 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 BCAT2O15382 392 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SH3BP5O60239 455 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PDE9AO76083 593 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 DCNP07585 359 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CAPGP40121 348 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 DCTP40126 519 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CAPZBP47756 277 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CRYBA2P53672 197 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 MAZP56270 477 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 KCNJ10P78508 379 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 RFX4Q33E94 735 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 OTUD3Q5T2D3 398 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 C18orf63Q68DL7 685 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 FRMPD2BQ6IN97 320 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 KRT80Q6KB66 452 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SHQ1Q6PI26 577 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ZC3H7AQ8IWR0 971 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 OR4N4Q8N0Y3 316 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 OR56A1Q8NGH5 318 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SUN3Q8TAQ9 357 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CNRIP1Q96F85 164 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SLC38A3Q99624 504 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CCDC3Q9BQI4 270 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF696Q9H7X3 374 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 DAPP1Q9UN19 280 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 C5orf58C9J3I9 102 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SRPX2O60687 465 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ALBP02768 609 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PROS1P07225 676 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 FHP07954 510 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PVRP15151 417 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ITGA2P17301 1181 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 TYRP1P17643 537 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 BCKDHBP21953 392 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CDH3P22223 829 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CPN2P22792 545 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 MYF6P23409 242 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 EPHA4P54764 986 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ITGA1P56199 1179 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PRR5P85299 388 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PPP2R2BQ00005 443 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 DEFB134Q4QY38 66 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 IFI44LQ53G44 452 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 NIPAL1Q6NVV3 410 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 TBPL2Q6SJ96 375 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 VTCN1Q7Z7D3 282 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ARMC8Q8IUR7 673 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 TMEFF1Q8IYR6 380 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CSNK1A1LQ8N752 337 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 HORMAD2Q8N7B1 307 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 C19orf47Q8N9M1 422 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 MIPOL1Q8TD10 442 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 UCN3Q969E3 161 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 TPD52L3Q96J77 140 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 SLC35G5Q96KT7 338 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 C7orf34Q96L11 122 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF681Q96N22 645 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 TRAPPC9Q96Q05 1148 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF347Q96SE7 839 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 NPLQ9BXD5 320 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 RAB33BQ9H082 229 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 C3orf14Q9HBI5 128 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PRDM6Q9NQX0 595 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 PNPLA3Q9NST1 481 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 ZCCHC3Q9NUD5 404 aaKnown RBP15.86■□□□□ 0.13
SSBP3-205ENST00000417664 CSNK1G3Q9Y6M4 447 aa15.86■□□□□ 0.13
SSBP3-205ENST00000417664 GON4LQ3T8J9 2241 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms