RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TMCO1Q9UM00 188 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 GTF3C1Q12789 2109 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 MYOCOSA0A1B0GUC4 107 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 H0YIV9 168 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 WWP2O00308 870 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 SAP18O00422 153 aaKnown RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 COX6B1P14854 86 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 TNFRSF8P28908 595 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 IGLV3-21P80748 117 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 TSNAXIP1Q2TAA8 658 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 OPN5Q6U736 354 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 C16orf47Q6ZP98 133 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 GOLGA7Q7Z5G4 137 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 FGD2Q7Z6J4 655 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 PLD6Q8N2A8 252 aaKnown RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 ZCCHC7Q8N3Z6 543 aaKnown RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 FAM57AQ8TBR7 257 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 RPF2Q9H7B2 306 aaKnown RBP23.5■■□□□ 1.35
VEGFA-208ENST00000417285 IPPKQ9H8X2 491 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 DMRT3Q9NQL9 472 aa23.5■■□□□ 1.35
VEGFA-208ENST00000417285 DCHS2Q6V1P9 2916 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 A0A087WUV0 522 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-208ENST00000417285 A0A1B0GTH9 108 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 LRRC14BA6NHZ5 514 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 POC1B-GALNT4F8VUJ3 575 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 HS6ST1O60243 411 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 OR6B1O95007 311 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 RFC3P40938 356 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 STT3AP46977 705 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 HK2P52789 917 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 GPR85P60893 370 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 CMPK2Q5EBM0 449 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 ARHGAP11AQ6P4F7 1023 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 RTL4Q6ZR62 310 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 CEP112Q8N8E3 955 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 MTFMTQ96DP5 389 aaKnown RBP23.49■■□□□ 1.35
VEGFA-208ENST00000417285 SENP5Q96HI0 755 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-208ENST00000417285 SCYL1Q96KG9 808 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 DMRTA2Q96SC8 542 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 MTERF1Q99551 399 aaKnown RBP23.49■■□□□ 1.35
VEGFA-208ENST00000417285 PLSCR2Q9NRY7 297 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 RYDENQ9NUL5 291 aaKnown RBP23.49■■□□□ 1.35
VEGFA-208ENST00000417285 ZNF180Q9UJW8 692 aa23.49■■□□□ 1.35
VEGFA-208ENST00000417285 ADAM10O14672 748 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 SIX3O95343 332 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-208ENST00000417285 COL6A2P12110 1019 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 CNR1P21554 472 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 SOX3P41225 446 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 CPSF6Q16630 551 aaKnown RBP eCLIP23.48■■□□□ 1.35
VEGFA-208ENST00000417285 MPEG1Q2M385 716 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 RNF175Q8N4F7 328 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 PTGR2Q8N8N7 351 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-208ENST00000417285 L3MBTL4Q8NA19 623 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 GOLM1Q8NBJ4 401 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 DGAT2Q96PD7 388 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 DEPPQ9NTK1 212 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 ZNF358Q9NW07 568 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 PKDREJQ9NTG1 2253 aa23.48■■□□□ 1.35
VEGFA-208ENST00000417285 ACOT7O00154 380 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 FGF17O60258 216 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 CDC40O60508 579 aaKnown RBP eCLIP23.47■■□□□ 1.352e-13■■□□□ 11.5
VEGFA-208ENST00000417285 SMIM24O75264 130 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ETHE1O95571 254 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ARL1P40616 181 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 BUD31P41223 144 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 RPS13P62277 151 aaKnown RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 PPIAP62937 165 aaKnown RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ID2Q02363 134 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 CUL3Q13618 768 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 PIGGQ5H8A4 983 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 TMEM211Q6ICI0 200 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 SLC22A16Q86VW1 577 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ZNF321PQ8N8H1 164 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 OR2M7Q8NG81 312 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 UHMK1Q8TAS1 419 aaKnown RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ZNF721Q8TF20 911 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ATP6V1E2Q96A05 226 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 PHF21BQ96EK2 531 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 ART5Q96L15 291 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 FAM173AQ9BQD7 235 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 SORBS1Q9BX66 1292 aaKnown RBP23.47■■□□□ 1.35
VEGFA-208ENST00000417285 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.47■■□□□ 1.352e-8■■□□□ 12.7
VEGFA-208ENST00000417285 COQ3Q9NZJ6 369 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 XPR1Q9UBH6 696 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 PPT2Q9UMR5 302 aa23.47■■□□□ 1.35
VEGFA-208ENST00000417285 TRIM49D1C9J1S8 452 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 STX16-NPEPL1H3BU86 382 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 FOXE1O00358 373 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-208ENST00000417285 PLPP1O14494 284 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 STX16O14662 325 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 ZNHIT1O43257 154 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 PROM1O43490 865 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 CLDN9O95484 217 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 TPOP07202 933 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 PLIN5Q00G26 463 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 PLGLB1Q02325 96 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 NDUFAF5Q5TEU4 345 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 GK5Q6ZS86 529 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 GDF7Q7Z4P5 450 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 OR4N5Q8IXE1 308 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms