RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SAYSD1Q9NPB0 183 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 COPS7AQ9UBW8 275 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 KCNN3Q9UGI6 736 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 ATG4BQ9Y4P1 393 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 SPACA6W5XKT8 324 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 TCRBV9S1A1TA0A576 114 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 SAP18O00422 153 aaKnown RBP13.68□□□□□ -0.22
RPS28-201ENST00000417088 SUSD5O60279 629 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
RPS28-201ENST00000417088 IGKV3-11P04433 115 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PCNAP12004 261 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 COX7A2P14406 83 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PIGAP37287 484 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PAFAH1B1P43034 410 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 SSR2P43308 183 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 MAN2A2P49641 1150 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 RAB10P61026 200 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PCDH1Q08174 1060 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 DLG1Q12959 904 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 SLC10A1Q14973 349 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 KHDRBS2Q5VWX1 349 aaKnown RBP13.68□□□□□ -0.22
RPS28-201ENST00000417088 MED27Q6P2C8 311 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 ADGRD1Q6QNK2 874 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 DGAT2L6Q6ZPD8 337 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 CHSY3Q70JA7 882 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 ISCA2Q86U28 154 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 LIX1LQ8IVB5 337 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 C9orf40Q8IXQ3 194 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 C7orf57Q8NEG2 295 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 OR7G3Q8NG95 312 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 NUBPLQ8TB37 319 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 STAG3L4Q8TBR4 150 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 UBE2E3Q969T4 207 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PPWD1Q96BP3 646 aaKnown RBP13.68□□□□□ -0.22
RPS28-201ENST00000417088 CMTM7Q96FZ5 175 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 DGAT2Q96PD7 388 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 SORBS1Q9BX66 1292 aaKnown RBP13.68□□□□□ -0.22
RPS28-201ENST00000417088 OR51B5Q9H339 312 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 ALG9Q9H6U8 611 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 SH2D2AQ9NP31 389 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 ACAD8Q9UKU7 415 aa13.68□□□□□ -0.22
RPS28-201ENST00000417088 AKAP6Q13023 2319 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 A0A0G2JNJ9 132 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 HRKO00198 91 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPS28-201ENST00000417088 NADKO95544 446 aaPredicted RBP13.67□□□□□ -0.22
RPS28-201ENST00000417088 ENDOUP21128 410 aaKnown RBP13.67□□□□□ -0.22
RPS28-201ENST00000417088 ADH7P40394 386 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 ZFP36L2P47974 494 aaKnown RBP13.67□□□□□ -0.22
RPS28-201ENST00000417088 DLX5P56178 289 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 GPX6P59796 221 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 SLAMF1Q13291 335 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 CES4AQ5XG92 561 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 OR4C11Q6IEV9 310 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 LYPD8Q6UX82 237 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 C3orf62Q6ZUJ4 267 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 TMEM200AQ86VY9 491 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 PAQR8Q8TEZ7 354 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 ATOH8Q96SQ7 321 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 CNPPD1Q9BV87 410 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 LDAHQ9H6V9 325 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
RPS28-201ENST00000417088 NUDT4Q9NZJ9 180 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 Q9UFV3 132 aa13.67□□□□□ -0.22
RPS28-201ENST00000417088 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.67□□□□□ -0.22
RPS28-201ENST00000417088 TRGV5A0A0B4J1U4 118 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 K7EPI3 171 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 UBXN8O00124 270 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 HCN1O60741 890 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 WDR1O75083 606 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 FAM155BO75949 473 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 GSTA2P09210 222 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 RFPL3SP0C7P2 107 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SLC35E2BP0CK96 405 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 CD1EP15812 388 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SERPINB1P30740 379 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SPRP35270 261 aaPredicted RBP13.66□□□□□ -0.22
RPS28-201ENST00000417088 FOLH1Q04609 750 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 MYBPHQ13203 477 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 BIKQ13323 160 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 C1orf185Q5T7R7 199 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 WLSQ5T9L3 541 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SLC22A10Q63ZE4 541 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 GRHL2Q6ISB3 625 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 CMC1Q7Z7K0 106 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 GPR180Q86V85 440 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 SLC22A8Q8TCC7 542 aa13.66□□□□□ -0.22
RPS28-201ENST00000417088 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms