RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 DMRTC2Q8IXT2 367 aaPredicted RBP13.34□□□□□ -0.27
PAF1-202ENST00000416728 OR7G3Q8NG95 312 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 SLC22A8Q8TCC7 542 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 CENPKQ9BS16 269 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 GRPEL1Q9HAV7 217 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
PAF1-202ENST00000416728 A0A1B0GVC2 190 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 AQP7O14520 342 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 KERAO60938 352 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 GSTA2P09210 222 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SLC35E2BP0CK96 405 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 GMPRP36959 345 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 MAN2A2P49641 1150 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 RAP1GDS1P52306 607 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 IGLV3-21P80748 117 aaPredicted RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 PLIN5Q00G26 463 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 FOXO1Q12778 655 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SLAMF1Q13291 335 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 DDX39BQ13838 428 aaKnown RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 SLC10A1Q14973 349 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 HYAL4Q2M3T9 481 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 PIGGQ5H8A4 983 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 OR4C11Q6IEV9 310 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SPNS3Q6ZMD2 512 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 CMC1Q7Z7K0 106 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 ISCA2Q86U28 154 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 PPM1NQ8N819 430 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SARAFQ96BY9 339 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 SENP5Q96HI0 755 aaPredicted RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 ART5Q96L15 291 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 ZNF559Q9BR84 538 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SORBS1Q9BX66 1292 aaKnown RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 OR51B5Q9H339 312 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 LDAHQ9H6V9 325 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 EXO5Q9H790 373 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 RPF2Q9H7B2 306 aaKnown RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.27
PAF1-202ENST00000416728 TUBA8Q9NY65 449 aaPredicted RBP13.33□□□□□ -0.27
PAF1-202ENST00000416728 TNFRSF10DQ9UBN6 386 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 KCNN3Q9UGI6 736 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.27
PAF1-202ENST00000416728 UBXN8O00124 270 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 SUSD5O60279 629 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 C1QAP02745 245 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 IGKV3-11P04433 115 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 HOXD4P09016 255 aaPredicted RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 CELA3AP09093 270 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 EPB42P16452 691 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 CRABP2P29373 138 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 TLX1P31314 330 aaPredicted RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 PIGAP37287 484 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 GPX6P59796 221 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 TNFRSF17Q02223 184 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 FOLH1Q04609 750 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 PCDH1Q08174 1060 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 DLG1Q12959 904 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 MYBPHQ13203 477 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 BIKQ13323 160 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 ZNF791Q3KP31 576 aaPredicted RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 KBTBD12Q3ZCT8 623 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 GPR180Q86V85 440 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 TMEM200AQ86VY9 491 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 HUS1BQ8NHY5 278 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 TANKQ92844 425 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 RGMAQ96B86 450 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 PPWD1Q96BP3 646 aaKnown RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 FBXL20Q96IG2 436 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 ATOH8Q96SQ7 321 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 SEMA4BQ9NPR2 832 aaPredicted RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 GRHL1Q9NZI5 618 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 PHF11Q9UIL8 331 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 FAM215AQ9Y5M1 114 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
PAF1-202ENST00000416728 TRGV5A0A0B4J1U4 118 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 RAD51CO43502 376 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 KLK8O60259 260 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 HCN1O60741 890 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 WDR1O75083 606 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 FAM155BO75949 473 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 GLI4P10075 376 aa13.32□□□□□ -0.28
PAF1-202ENST00000416728 BUD31P41223 144 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms