RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TRIP11Q15643 1979 aa7.5□□□□□ -1.21
SIK3-203ENST00000415541 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TGM5O43548 720 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 IL1RNP18510 177 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 LCN1P31025 176 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 WASP42768 502 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 DIO3P55073 304 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 SNRPD1P62314 119 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 GPM6BQ13491 265 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 BOP1Q14137 746 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 IQCCQ4KMZ1 466 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 FNDC3BQ53EP0 1204 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 MPPE1Q53F39 396 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PAN3Q58A45 887 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 CD276Q5ZPR3 534 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CPZQ66K79 652 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 ZNF549Q6P9A3 640 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PSRC1Q6PGN9 363 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 CEP97Q8IW35 865 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 SLC39A11Q8N1S5 342 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PGBD3Q8N328 593 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 C12orf45Q8N5I9 185 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 OR4L1Q8NH43 312 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 OR10A6Q8NH74 314 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PLD4Q96BZ4 506 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 FAM120BQ96EK7 910 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 NARS2Q96I59 477 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 TOX2Q96NM4 488 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 BBS4Q96RK4 519 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 SIGLEC11Q96RL6 698 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MS4A7Q9GZW8 240 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 IL23AQ9NPF7 189 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MSRAQ9UJ68 235 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PURGQ9UJV8 347 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 DUSP12Q9UNI6 340 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 WNT6Q9Y6F9 365 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 GRXCR1A8MXD5 290 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CREG1O75629 220 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 AP2A2O94973 939 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 HIST1H2AGP0C0S8 130 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 HIST1H2ADP20671 130 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PTBP1P26599 531 aaKnown RBP eCLIP7.49□□□□□ -1.216e-7■■■■■ 30.9
SIK3-203ENST00000415541 SSTR2P30874 369 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MC4RP32245 332 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MAGEA2P43356 314 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MRPL19P49406 292 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 DAPP51397 102 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CLCN5P51795 746 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 C1DQ13901 141 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 IL18Q14116 193 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 DSG2Q14126 1118 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 KRT33BQ14525 404 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TEAD2Q15562 447 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PABPC1L2AQ5JQF8 200 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 AFTPHQ6ULP2 937 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 GCNT7Q6ZNI0 430 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 RPS27LQ71UM5 84 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 TMEM179BQ7Z7N9 219 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 ZNF655Q8N720 491 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 HIST1H2AHQ96KK5 128 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PITX2Q99697 317 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 HIST1H2AJQ99878 128 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TREX2Q9BQ50 279 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 H2AFJQ9BTM1 129 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MED18Q9BUE0 208 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CD244Q9BZW8 370 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 HEXA-AS1Q9H8Q6 139 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 ZNF334Q9HCZ1 680 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 AMBNQ9NP70 447 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 DCAF13Q9NV06 445 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 HCFC1R1Q9NWW0 138 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 SCP2D1Q9UJQ7 156 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TRIOBPQ9H2D6 2365 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CARNS1A5YM72 827 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 ISM1B1AKI9 464 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 AIPO00170 330 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 ARNTLO00327 626 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CHP2O43745 196 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PCDHGA12O60330 932 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PEPDP12955 493 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MAZP56270 477 aaKnown RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 SERINC3Q13530 473 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 UNC50Q53HI1 259 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MSANTD2Q6P1R3 559 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MZT2AQ6P582 158 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 HAGHLQ6PII5 290 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 FAM198BQ6UWH4 519 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 NUDT18Q6ZVK8 323 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 HSD17B13Q7Z5P4 300 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 ENTHD1Q8IYW4 607 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 CLDN22Q8N7P3 220 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 OR4F6Q8NGB9 312 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 TBC1D20Q96BZ9 403 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 OR2M2Q96R28 347 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 C11orf84Q9BUA3 381 aaPredicted RBP7.49□□□□□ -1.21
SIK3-203ENST00000415541 NIT2Q9NQR4 276 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 MED11Q9P086 117 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PPIEQ9UNP9 301 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms