RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PXNP49023 591 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 RPS13P62277 151 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 IL1RL1Q01638 556 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 SIGLEC14Q08ET2 396 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 VMACQ2NL98 169 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 PGS1Q32NB8 556 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 P3H2Q8IVL5 708 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 HS3ST5Q8IZT8 346 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 KRTCAP2Q8N6L1 136 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CNIH3Q8TBE1 160 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 DYNC2LI1Q8TCX1 351 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 LCN9Q8WX39 176 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 DNASE2BQ8WZ79 361 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 MYDGFQ969H8 173 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 APOLD1Q96LR9 279 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ZNF300Q96RE9 604 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 PITX2Q99697 317 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 SARGQ9BW04 601 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ACAT2Q9BWD1 397 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 DUSP15Q9H1R2 295 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 MMP27Q9H306 513 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 IKZF5Q9H5V7 419 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 TMEM184CQ9NVA4 438 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 FAM120CQ9NX05 1096 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 ERVK-18Q9QC07 812 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 DLGAP4Q9Y2H0 992 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 TP53BP1Q12888 1972 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 TRBC2A0A5B9 178 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ANKDD1BA6NHY2 528 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 TLR4O00206 839 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CSF2P04141 144 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 NME1P15531 152 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 PRKACGP22612 351 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CMPK1P30085 196 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 PPP5CP53041 499 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 MLLT10P55197 1068 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ITGA1P56199 1179 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 UBE2IP63279 158 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 TEKQ02763 1124 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 CDC20Q12834 499 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 VEZF1Q14119 521 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 KIR2DS3Q14952 304 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 MAD2L1BPQ15013 274 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 ELOCQ15369 112 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ZNF181Q2M3W8 571 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 LAIR2Q6ISS4 152 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 EIF3MQ7L2H7 374 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 PIWIL3Q7Z3Z3 882 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 TMEM179BQ7Z7N9 219 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 TRIM48Q8IWZ4 208 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 C2orf73Q8N5S3 287 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 TBC1D19Q8N5T2 526 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 LMNTD1Q8N9Z9 388 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ATG16L2Q8NAA4 619 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 KBTBD8Q8NFY9 601 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 HSPA12BQ96MM6 686 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 EPYCQ99645 322 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ITPAQ9BY32 194 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 SPNS1Q9H2V7 528 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 XKR8Q9H6D3 395 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 MRPS30Q9NP92 439 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 SERHLQ9NQF3 203 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 ADPRHL2Q9NX46 363 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 AHSPQ9NZD4 102 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 PDP1Q9P0J1 537 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 KLF15Q9UIH9 416 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 NDRG4Q9ULP0 352 aaKnown RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 GPC6Q9Y625 555 aaPredicted RBP11.01□□□□□ -0.65
RFFL-205ENST00000415395 U3KQV3 271 aa11.01□□□□□ -0.65
RFFL-205ENST00000415395 XPNPEP2O43895 674 aa11□□□□□ -0.65
RFFL-205ENST00000415395 VIPP01282 170 aa11□□□□□ -0.65
RFFL-205ENST00000415395 C9P02748 559 aa11□□□□□ -0.65
RFFL-205ENST00000415395 MT-ND2P03891 347 aa11□□□□□ -0.65
RFFL-205ENST00000415395 CHRM5P08912 532 aaPredicted RBP11□□□□□ -0.65
RFFL-205ENST00000415395 HOXB9P17482 250 aaPredicted RBP11□□□□□ -0.65
RFFL-205ENST00000415395 ACVR2AP27037 513 aa11□□□□□ -0.65
RFFL-205ENST00000415395 PSMB5P28074 263 aa11□□□□□ -0.65
RFFL-205ENST00000415395 TIA1P31483 386 aaKnown RBP eCLIP11□□□□□ -0.65
RFFL-205ENST00000415395 FMO3P31513 532 aa11□□□□□ -0.65
RFFL-205ENST00000415395 CSNK1G2P78368 415 aa11□□□□□ -0.65
RFFL-205ENST00000415395 PIGFQ07326 219 aa11□□□□□ -0.65
RFFL-205ENST00000415395 KHDRBS1Q07666 443 aaKnown RBP eCLIP11□□□□□ -0.65
RFFL-205ENST00000415395 ADPRMQ3LIE5 342 aa11□□□□□ -0.65
RFFL-205ENST00000415395 GTDC1Q4AE62 458 aa11□□□□□ -0.65
RFFL-205ENST00000415395 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
RFFL-205ENST00000415395 PERM1Q5SV97 790 aa11□□□□□ -0.65
RFFL-205ENST00000415395 UBE2UQ5VVX9 321 aa11□□□□□ -0.65
RFFL-205ENST00000415395 USP43Q70EL4 1123 aa11□□□□□ -0.65
RFFL-205ENST00000415395 TAF8Q7Z7C8 310 aa11□□□□□ -0.65
RFFL-205ENST00000415395 GALNT5Q7Z7M9 940 aa11□□□□□ -0.65
RFFL-205ENST00000415395 SLC9B2Q86UD5 537 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms