RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 HBA1P69905 142 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 TEKQ02763 1124 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 TSTA3Q13630 321 aaPredicted RBP14.08□□□□□ -0.16
USP4-203ENST00000415188 NFE2L1Q14494 772 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 AGERQ15109 404 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 MOGQ16653 247 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 GALNT5Q7Z7M9 940 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 SLCO6A1Q86UG4 719 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 C17orf64Q86WR6 236 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 FAM129CQ86XR2 697 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 NAGSQ8N159 534 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 ATG16L2Q8NAA4 619 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 OR10Q1Q8NGQ4 319 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 OR14C36Q8NHC7 312 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 WDR48Q8TAF3 677 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 BORCS5Q969J3 196 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 TPD52L3Q96J77 140 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 AIF1LQ9BQI0 150 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 RUBCNLQ9H714 662 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 PALMDQ9NP74 551 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 WASH6PQ9NQA3 447 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 ANGPT4Q9Y264 503 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 ASF1AQ9Y294 204 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 MSRB2Q9Y3D2 182 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 CFAP47Q6ZTR5 3102 aa14.08□□□□□ -0.16
USP4-203ENST00000415188 WDFY3Q8IZQ1 3526 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 H0Y8X5 98 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 TGFB1P01137 390 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 WNT1P04628 370 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 NUDT7P0C024 238 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 ARAFP10398 606 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 C5AR1P21730 350 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 UQCRC2P22695 453 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 DRD3P35462 400 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 CRATP43155 626 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 CTSKP43235 329 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 CRYBA2P53672 197 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 TAS2R50P59544 299 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 PPP2CBP62714 309 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 PPP2CAP67775 309 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 SLC35A2P78381 396 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 SCARB2Q14108 478 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 C16orf72Q14CZ0 275 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 MAD2L1BPQ15013 274 aaPredicted RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 CRB2Q5IJ48 1285 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 PNCKQ6P2M8 343 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 DBX2Q6ZNG2 339 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 FAM83HQ6ZRV2 1179 aaPredicted RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 LINC00299Q6ZSB3 139 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 PAGE2Q7Z2X7 111 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 B3GNT8Q7Z7M8 397 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 SLC9B2Q86UD5 537 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 KDF1Q8NAX2 398 aaPredicted RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 BPIFB6Q8NFQ5 453 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 BAHD1Q8TBE0 780 aaPredicted RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 TBC1D15Q8TC07 691 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 GIPC3Q8TF64 312 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 BARD1Q99728 777 aaKnown RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 PSD2Q9BQI7 771 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 NAA50Q9GZZ1 169 aaKnown RBP14.07□□□□□ -0.16
USP4-203ENST00000415188 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 SPASTQ9UBP0 616 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 ADAM29Q9UKF5 820 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 PCDHGB2Q9Y5G2 931 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 TMEM131Q92545 1883 aa14.07□□□□□ -0.16
USP4-203ENST00000415188 A0A1W2PRB8 838 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 C1QCP02747 245 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 ANXA8P13928 327 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 EFNA1P20827 205 aaPredicted RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 PRIM2P49643 509 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 RACK1P63244 317 aaKnown RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 CDK6Q00534 326 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 REEP5Q00765 189 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 EEF1A2Q05639 463 aaKnown RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 NPRL3Q12980 569 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 ZNF829Q3KNS6 432 aaPredicted RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 FGD3Q5JSP0 725 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 PIP5KL1Q5T9C9 394 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 RAB42Q8N4Z0 105 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 ABHD11Q8NFV4 315 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 OR5K2Q8NHB8 316 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 CNIH3Q8TBE1 160 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 RHBDD1Q8TEB9 315 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 SMPDL3AQ92484 453 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 TFGQ92734 400 aaPredicted RBP14.06□□□□□ -0.16
USP4-203ENST00000415188 RORBQ92753 470 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 FKBP10Q96AY3 582 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 C1GALT1Q9NS00 363 aa14.06□□□□□ -0.16
USP4-203ENST00000415188 TBC1D23Q9NUY8 699 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms