RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 UBE3DQ7Z6J8 389 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 ZBED8Q8IZ13 594 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 SRFBP1Q8NEF9 429 aaKnown RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF721Q8TF20 911 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 ANKRD9Q96BM1 317 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 RMND5BQ96G75 393 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 TBCDQ9BTW9 1192 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 SLC6A15Q9H2J7 730 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 CLEC4MQ9H2X3 399 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 EHD1Q9H4M9 534 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 POPDC3Q9HBV1 291 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 RNF112Q9ULX5 631 aa17.83■□□□□ 0.44
UBXN4-202ENST00000415164 BOKQ9UMX3 212 aaPredicted RBP17.83■□□□□ 0.44
UBXN4-202ENST00000415164 FAM47E-STBD1D6RA91 191 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 CES2O00748 559 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 FGF17O60258 216 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 CTAG2O75638 210 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 RFPL3SP0C7P2 107 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 GABRA1P14867 456 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 RAP1GDS1P52306 607 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 POU4F1Q01851 419 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 FRG1Q14331 258 aaKnown RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 OR4D1Q15615 310 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 PIGGQ5H8A4 983 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 SYDE1Q6ZW31 735 aaPredicted RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 C9orf40Q8IXQ3 194 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 GOT1L1Q8NHS2 421 aaPredicted RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 TSPAN17Q96FV3 270 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 SENP5Q96HI0 755 aaPredicted RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 TMUB1Q9BVT8 246 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 SORBS1Q9BX66 1292 aaKnown RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 MS4A8Q9BY19 250 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 TRMT1Q9NXH9 659 aaKnown RBP17.82■□□□□ 0.44
UBXN4-202ENST00000415164 PLEKHA6Q9Y2H5 1048 aa17.82■□□□□ 0.44
UBXN4-202ENST00000415164 PHF3Q92576 2039 aaKnown RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 HRKO00198 91 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 HCN1O60741 890 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 CD1DP15813 335 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 ENDOUP21128 410 aaKnown RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 BMP5P22003 454 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 HIST1H1TP22492 207 aaPredicted RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 DNASE1P24855 282 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 STT3AP46977 705 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 SLAMF1Q13291 335 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 MPEG1Q2M385 716 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 RIPPLY2Q5TAB7 128 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 CHSY3Q70JA7 882 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 MYLK4Q86YV6 388 aaPredicted RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 TGIF2LYQ8IUE0 185 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 RBM18Q96H35 190 aaKnown RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 FOXC2Q99958 501 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 OR51B5Q9H339 312 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF703Q9H7S9 590 aaPredicted RBP17.81■□□□□ 0.44
UBXN4-202ENST00000415164 ZFP64Q9NPA5 681 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 SMYD2Q9NRG4 433 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 MOCS1Q9NZB8 636 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 CRIM1Q9NZV1 1036 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 B4GALT7Q9UBV7 327 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 ST6GALNAC2Q9UJ37 374 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 DNAJC13O75165 2243 aa17.81■□□□□ 0.44
UBXN4-202ENST00000415164 C15orf38-AP3S2A0A0A6YYH1 394 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 IQANK1A0A1B0GTG1 560 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 EFCAB8A8MWE9 144 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 PRKRAO75569 313 aaKnown RBP17.8■□□□□ 0.44
UBXN4-202ENST00000415164 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
UBXN4-202ENST00000415164 STMN1P16949 149 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 KLK2P20151 261 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 GDF1P27539 372 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 GGT5P36269 586 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 DGKQP52824 942 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 WNT3P56703 355 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 ATP6V0D1P61421 351 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 PLIN5Q00G26 463 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 HYAL4Q2M3T9 481 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 TMEM35AQ53FP2 167 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 MED27Q6P2C8 311 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 DGAT2L6Q6ZPD8 337 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 SLC29A4Q7RTT9 530 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 ULK2Q8IYT8 1036 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 RNF175Q8N4F7 328 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 NUBPLQ8TB37 319 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
UBXN4-202ENST00000415164 NINJ1Q92982 152 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 UBE2E3Q969T4 207 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 SPACA9Q96E40 222 aaPredicted RBP17.8■□□□□ 0.44
UBXN4-202ENST00000415164 ART5Q96L15 291 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF358Q9NW07 568 aa17.8■□□□□ 0.44
UBXN4-202ENST00000415164 HSPB2A8KAH6 182 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 OR10H2O60403 315 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 SUPT3HO75486 399 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 TCP1P17987 556 aaKnown RBP17.79■□□□□ 0.44
UBXN4-202ENST00000415164 GMPRP36959 345 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 HERVK_113P63132 956 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ERVK-8P63133 956 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF267Q14586 743 aaPredicted RBP17.79■□□□□ 0.44
UBXN4-202ENST00000415164 HSPB2Q16082 182 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ZNF791Q3KP31 576 aaPredicted RBP17.79■□□□□ 0.44
UBXN4-202ENST00000415164 KRTAP21-3Q3LHN1 58 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 C18orf63Q68DL7 685 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms