RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 HMGB1P1B2RPK0 211 aaPredicted RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 H7C0S8 307 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 TNFSF11O14788 317 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 IFIT3O14879 490 aaKnown RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 KIAA0513O60268 411 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 TSC22D2O75157 780 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 IGHG3P01860 377 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 GJB2P29033 226 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 MDH2P40926 338 aaKnown RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 CCR4P51679 360 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ERVPABLB-1P60509 514 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 AKAP17AQ02040 695 aaKnown RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 TFCP2Q12800 502 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 C14orf28Q4W4Y0 310 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 CLEC4GQ6UXB4 293 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 METTL23Q86XA0 190 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 THNSL1Q8IYQ7 743 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ARL14Q8N4G2 192 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ZNF491Q8N8L2 437 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ICA1LQ8NDH6 482 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 OR1K1Q8NGR3 316 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 UBLCP1Q8WVY7 318 aaPredicted RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ESAMQ96AP7 390 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 RASL10BQ96S79 203 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 MAPKAP1Q9BPZ7 522 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 LRRC2Q9BYS8 371 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 ELL3Q9HB65 397 aaPredicted RBP3.67□□□□□ -1.82
ATG4C-204ENST00000414558 PLEK2Q9NYT0 353 aa3.67□□□□□ -1.82
ATG4C-204ENST00000414558 SLC30A4O14863 429 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 WDR46O15213 610 aaKnown RBP3.66□□□□□ -1.82
ATG4C-204ENST00000414558 CSO75390 466 aaKnown RBP3.66□□□□□ -1.82
ATG4C-204ENST00000414558 RAD51DO75771 328 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 CCDC159P0C7I6 412 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 P4HA1P13674 534 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 CCND3P30281 292 aaPredicted RBP3.66□□□□□ -1.82
ATG4C-204ENST00000414558 SLC25A1P53007 311 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 MFGE8Q08431 387 aaPredicted RBP3.66□□□□□ -1.82
ATG4C-204ENST00000414558 CAPN13Q6MZZ7 669 aaPredicted RBP3.66□□□□□ -1.82
ATG4C-204ENST00000414558 C16orf58Q96GQ5 468 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 RAB40CQ96S21 281 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 ZNF446Q9NWS9 450 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 MIS18AQ9NYP9 233 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 RALGAPA1Q6GYQ0 2036 aa3.66□□□□□ -1.82
ATG4C-204ENST00000414558 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 SYT7O43581 403 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 ODC1P11926 461 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 CALML3P27482 149 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 GDF1P27539 372 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 HMGCLP35914 325 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 RPL27P61353 136 aaKnown RBP3.65□□□□□ -1.83
ATG4C-204ENST00000414558 SCN1BQ07699 218 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 EIF4EBP2Q13542 120 aaPredicted RBP3.65□□□□□ -1.83
ATG4C-204ENST00000414558 EMC2Q15006 297 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 PPP1R3AQ16821 1122 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 ANKRD55Q3KP44 614 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 AGAP6Q5VW22 663 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 SNRNP48Q6IEG0 339 aaKnown RBP3.65□□□□□ -1.83
ATG4C-204ENST00000414558 C17orf64Q86WR6 236 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 CCDC197Q8NCU1 140 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 VN1R17PQ8TDU5 208 aa3.65□□□□□ -1.83
ATG4C-204ENST00000414558 MRPL24Q96A35 216 aaKnown RBP3.65□□□□□ -1.83
ATG4C-204ENST00000414558 RCOR3Q9P2K3 495 aaPredicted RBP3.65□□□□□ -1.83
ATG4C-204ENST00000414558 ATP6AP2A0A1C7CYW4 349 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 ST8SIA3O43173 380 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 GSTA2P09210 222 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 GLRA1P23415 457 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 ACKR1Q16570 336 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
ATG4C-204ENST00000414558 C1orf189Q5VU69 101 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 CAVIN1Q6NZI2 390 aaKnown RBP3.64□□□□□ -1.83
ATG4C-204ENST00000414558 PET117Q6UWS5 81 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 SIGLEC15Q6ZMC9 328 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 KLHL7Q8IXQ5 586 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 GOLGA5Q8TBA6 731 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 AFAP1L1Q8TED9 768 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 FAM162AQ96A26 154 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 NUS1Q96E22 293 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 SERINC2Q96SA4 455 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 CUEDC2Q9H467 287 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 EIF3KQ9UBQ5 218 aaKnown RBP3.64□□□□□ -1.83
ATG4C-204ENST00000414558 PLEKHA6Q9Y2H5 1048 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 POMT1Q9Y6A1 747 aa3.64□□□□□ -1.83
ATG4C-204ENST00000414558 MAGEB16A2A368 324 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 SAP18O00422 153 aaKnown RBP3.63□□□□□ -1.83
ATG4C-204ENST00000414558 PGAM2P15259 253 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 CASTP20810 708 aaKnown RBP3.63□□□□□ -1.83
ATG4C-204ENST00000414558 MAGEA9P43362 315 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 CXCL6P80162 114 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 MEF2DQ14814 521 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 KIAA0040Q15053 153 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 ODF2Q5BJF6 829 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 WDR25Q64LD2 544 aaPredicted RBP3.63□□□□□ -1.83
ATG4C-204ENST00000414558 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
ATG4C-204ENST00000414558 UXS1Q8NBZ7 420 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 SPATA18Q8TC71 538 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 PCED1BQ96HM7 432 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 TTYH2Q9BSA4 534 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 EDEM3Q9BZQ6 932 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 WWP1Q9H0M0 922 aa3.63□□□□□ -1.83
ATG4C-204ENST00000414558 MLXQ9UH92 298 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms